Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
CLK3P49761 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.86
CLK3P49761 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.4□□□□□ -1.86
CLK3P49761 Y_RNA.48-201ENST00000362710 103 ntBASIC3.4□□□□□ -1.87
CLK3P49761 RNA5SP42-201ENST00000364278 115 ntBASIC3.4□□□□□ -1.87
CLK3P49761 RNU6-806P-201ENST00000365147 105 ntBASIC3.4□□□□□ -1.87
CLK3P49761 Y_RNA.785-201ENST00000384290 109 ntBASIC3.4□□□□□ -1.87
CLK3P49761 MIR554-201ENST00000384874 96 ntBASIC3.4□□□□□ -1.87
CLK3P49761 SNORD73A-201ENST00000386062 65 ntBASIC3.4□□□□□ -1.87
CLK3P49761 RNU6-1197P-201ENST00000391183 107 ntBASIC3.4□□□□□ -1.87
CLK3P49761 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CLK3P49761 RNU6-607P-201ENST00000411283 108 ntBASIC3.4□□□□□ -1.87
CLK3P49761 MTCO3P19-201ENST00000415864 321 ntBASIC3.4□□□□□ -1.87
CLK3P49761 AL590135.1-201ENST00000422215 156 ntBASIC3.4□□□□□ -1.87
CLK3P49761 AC006989.1-201ENST00000427212 131 ntBASIC3.4□□□□□ -1.87
CLK3P49761 HMGB1P27-201ENST00000431429 603 ntBASIC3.4□□□□□ -1.87
CLK3P49761 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.4□□□□□ -1.87
CLK3P49761 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.4□□□□□ -1.87
CLK3P49761 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.4□□□□□ -1.87
CLK3P49761 AL360271.2-201ENST00000447710 161 ntBASIC3.4□□□□□ -1.87
CLK3P49761 PRDX3P3-201ENST00000447765 522 ntBASIC3.4□□□□□ -1.87
CLK3P49761 RPS3AP46-201ENST00000448352 682 ntBASIC3.4□□□□□ -1.87
CLK3P49761 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.4□□□□□ -1.87
CLK3P49761 AC092185.1-201ENST00000491371 97 ntBASIC3.4□□□□□ -1.87
CLK3P49761 GZMAP1-201ENST00000503054 631 ntBASIC3.4□□□□□ -1.87
CLK3P49761 AC110768.1-201ENST00000509222 400 ntBASIC3.4□□□□□ -1.87
CLK3P49761 MTND3P25-201ENST00000509243 135 ntBASIC3.4□□□□□ -1.87
CLK3P49761 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.4□□□□□ -1.87
CLK3P49761 RNU6-138P-201ENST00000515952 107 ntBASIC3.4□□□□□ -1.87
CLK3P49761 RNU6-927P-201ENST00000516199 100 ntBASIC3.4□□□□□ -1.87
CLK3P49761 Y_RNA.687-201ENST00000516558 91 ntBASIC3.4□□□□□ -1.87
CLK3P49761 RNU6-914P-201ENST00000516749 109 ntBASIC3.4□□□□□ -1.87
CLK3P49761 SCARNA14-201ENST00000516903 136 ntBASIC3.4□□□□□ -1.87
CLK3P49761 RNU6-182P-201ENST00000516970 105 ntBASIC3.4□□□□□ -1.87
CLK3P49761 RNU6-789P-201ENST00000517105 102 ntBASIC3.4□□□□□ -1.87
CLK3P49761 RNU6-897P-201ENST00000517135 105 ntBASIC3.4□□□□□ -1.87
CLK3P49761 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.4□□□□□ -1.87
CLK3P49761 AC011602.1-201ENST00000546484 331 ntBASIC3.4□□□□□ -1.87
CLK3P49761 AL137100.2-201ENST00000555786 315 ntBASIC3.4□□□□□ -1.87
CLK3P49761 TGIF1P1-201ENST00000558095 802 ntBASIC3.4□□□□□ -1.87
CLK3P49761 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.4□□□□□ -1.87
CLK3P49761 AC090517.1-201ENST00000569307 266 ntBASIC3.4□□□□□ -1.87
CLK3P49761 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CLK3P49761 AL159153.1-201ENST00000619688 317 ntBASIC3.4□□□□□ -1.87
CLK3P49761 SDR42E1P4-201ENST00000620894 481 ntBASIC3.4□□□□□ -1.87
CLK3P49761 AC130454.1-201ENST00000622948 401 ntBASIC3.4□□□□□ -1.87
CLK3P49761 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CLK3P49761 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.4□□□□□ -1.87
CLK3P49761 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CLK3P49761 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CLK3P49761 AC058791.1-201ENST00000608412 3198 ntBASIC3.39□□□□□ -1.87
CLK3P49761 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.39□□□□□ -1.87
CLK3P49761 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.39□□□□□ -1.87
CLK3P49761 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.39□□□□□ -1.87
CLK3P49761 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CLK3P49761 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CLK3P49761 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CLK3P49761 AC090740.1-201ENST00000623193 2262 ntBASIC3.39□□□□□ -1.87
CLK3P49761 MIR30E-201ENST00000362104 92 ntBASIC3.39□□□□□ -1.87
CLK3P49761 RNY3P11-201ENST00000364153 102 ntBASIC3.39□□□□□ -1.87
CLK3P49761 AP002088.1-201ENST00000382740 395 ntBASIC3.39□□□□□ -1.87
CLK3P49761 SNORA51.11-201ENST00000384442 131 ntBASIC3.39□□□□□ -1.87
CLK3P49761 MIR578-201ENST00000384828 96 ntBASIC3.39□□□□□ -1.87
CLK3P49761 SAR1AP2-201ENST00000392696 594 ntBASIC3.39□□□□□ -1.87
CLK3P49761 AL591034.1-201ENST00000407447 340 ntBASIC3.39□□□□□ -1.87
CLK3P49761 AC091390.3-201ENST00000426478 338 ntBASIC3.39□□□□□ -1.87
CLK3P49761 NDUFB4P6-201ENST00000436819 366 ntBASIC3.39□□□□□ -1.87
CLK3P49761 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.39□□□□□ -1.87
CLK3P49761 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.39□□□□□ -1.87
CLK3P49761 OR2AQ1P-201ENST00000451972 200 ntBASIC3.39□□□□□ -1.87
CLK3P49761 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.39□□□□□ -1.87
CLK3P49761 RPS20P22-201ENST00000473700 357 ntBASIC3.39□□□□□ -1.87
CLK3P49761 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.39□□□□□ -1.87
CLK3P49761 Y_RNA.673-201ENST00000516306 88 ntBASIC3.39□□□□□ -1.87
CLK3P49761 RNU6-911P-201ENST00000516523 104 ntBASIC3.39□□□□□ -1.87
CLK3P49761 Y_RNA.700-201ENST00000516806 100 ntBASIC3.39□□□□□ -1.87
CLK3P49761 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.39□□□□□ -1.87
CLK3P49761 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.39□□□□□ -1.87
CLK3P49761 MIR548AC-201ENST00000585049 88 ntBASIC3.39□□□□□ -1.87
CLK3P49761 AL390123.1-201ENST00000603216 237 ntBASIC3.39□□□□□ -1.87
CLK3P49761 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
CLK3P49761 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.39□□□□□ -1.87
CLK3P49761 AL512643.1-201ENST00000635735 524 ntBASIC3.39□□□□□ -1.87
CLK3P49761 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CLK3P49761 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
CLK3P49761 PWAR6-201ENST00000552334 4618 ntBASIC3.39□□□□□ -1.87
CLK3P49761 ZNF285B-201ENST00000561698 1767 ntBASIC3.38□□□□□ -1.87
CLK3P49761 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
CLK3P49761 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.38□□□□□ -1.87
CLK3P49761 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CLK3P49761 Y_RNA.20-201ENST00000362479 113 ntBASIC3.38□□□□□ -1.87
CLK3P49761 RNU1-35P-201ENST00000362782 153 ntBASIC3.38□□□□□ -1.87
CLK3P49761 Y_RNA.534-201ENST00000384599 112 ntBASIC3.38□□□□□ -1.87
CLK3P49761 Y_RNA.555-201ENST00000384673 110 ntBASIC3.38□□□□□ -1.87
CLK3P49761 CYCSP19-201ENST00000411715 316 ntBASIC3.38□□□□□ -1.87
CLK3P49761 CYCSP33-201ENST00000414485 327 ntBASIC3.38□□□□□ -1.87
CLK3P49761 MTND5P15-201ENST00000434246 349 ntBASIC3.38□□□□□ -1.87
CLK3P49761 AC006539.3-201ENST00000454258 129 ntBASIC3.38□□□□□ -1.87
CLK3P49761 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.38□□□□□ -1.87
CLK3P49761 RPS27P29-201ENST00000463110 252 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 129.5 ms