Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.74□□□□□ -2.13
CX3CR1P49238 MTAPP1-201ENST00000489154 819 ntBASIC1.74□□□□□ -2.13
CX3CR1P49238 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.74□□□□□ -2.13
CX3CR1P49238 HMGB1P30-201ENST00000492455 606 ntBASIC1.74□□□□□ -2.13
CX3CR1P49238 RPL9P6-201ENST00000492764 598 ntBASIC1.74□□□□□ -2.13
CX3CR1P49238 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.74□□□□□ -2.13
CX3CR1P49238 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.74□□□□□ -2.13
CX3CR1P49238 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.74□□□□□ -2.13
CX3CR1P49238 AC112206.3-201ENST00000514578 389 ntBASIC1.74□□□□□ -2.13
CX3CR1P49238 IMMP1LP2-201ENST00000552954 492 ntBASIC1.74□□□□□ -2.13
CX3CR1P49238 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC1.74□□□□□ -2.13
CX3CR1P49238 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
CX3CR1P49238 AC008521.1-201ENST00000587471 187 ntBASIC1.74□□□□□ -2.13
CX3CR1P49238 AC012409.4-201ENST00000612923 249 ntBASIC1.74□□□□□ -2.13
CX3CR1P49238 uc_338.15-201ENST00000615470 191 ntBASIC1.74□□□□□ -2.13
CX3CR1P49238 AL359547.2-201ENST00000615810 418 ntBASIC1.74□□□□□ -2.13
CX3CR1P49238 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.74□□□□□ -2.13
CX3CR1P49238 MIR6852-201ENST00000621699 66 ntBASIC1.74□□□□□ -2.13
CX3CR1P49238 AC091931.1-201ENST00000623488 728 ntBASIC1.74□□□□□ -2.13
CX3CR1P49238 AC093648.1-201ENST00000623546 606 ntBASIC1.74□□□□□ -2.13
CX3CR1P49238 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.74□□□□□ -2.13
CX3CR1P49238 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.73□□□□□ -2.13
CX3CR1P49238 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
CX3CR1P49238 AC073343.1-201ENST00000328239 651 ntBASIC1.73□□□□□ -2.13
CX3CR1P49238 RNU6-529P-201ENST00000363383 104 ntBASIC1.73□□□□□ -2.13
CX3CR1P49238 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
CX3CR1P49238 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
CX3CR1P49238 SNORA20.2-201ENST00000383922 131 ntBASIC1.73□□□□□ -2.13
CX3CR1P49238 RNU6-72P-201ENST00000384285 79 ntBASIC1.73□□□□□ -2.13
CX3CR1P49238 MRPL42P2-201ENST00000403169 426 ntBASIC1.73□□□□□ -2.13
CX3CR1P49238 RNA5SP425-201ENST00000410336 112 ntBASIC1.73□□□□□ -2.13
CX3CR1P49238 RNA5SP508-201ENST00000411327 119 ntBASIC1.73□□□□□ -2.13
CX3CR1P49238 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.73□□□□□ -2.13
CX3CR1P49238 Z98742.3-201ENST00000418637 326 ntBASIC1.73□□□□□ -2.13
CX3CR1P49238 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC1.73□□□□□ -2.13
CX3CR1P49238 AC000111.3-201ENST00000433478 193 ntBASIC1.73□□□□□ -2.13
CX3CR1P49238 RPS24P1-201ENST00000438550 371 ntBASIC1.73□□□□□ -2.13
CX3CR1P49238 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.73□□□□□ -2.13
CX3CR1P49238 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.73□□□□□ -2.13
CX3CR1P49238 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.73□□□□□ -2.13
CX3CR1P49238 MTCO2P6-201ENST00000463134 685 ntBASIC1.73□□□□□ -2.13
CX3CR1P49238 RPL23AP42-201ENST00000471152 471 ntBASIC1.73□□□□□ -2.13
CX3CR1P49238 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.73□□□□□ -2.13
CX3CR1P49238 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.73□□□□□ -2.13
CX3CR1P49238 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
CX3CR1P49238 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.73□□□□□ -2.13
CX3CR1P49238 MRPS17P9-201ENST00000511924 393 ntBASIC1.73□□□□□ -2.13
CX3CR1P49238 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.73□□□□□ -2.13
CX3CR1P49238 RNU6-667P-201ENST00000517186 102 ntBASIC1.73□□□□□ -2.13
CX3CR1P49238 AC109329.1-201ENST00000518744 317 ntBASIC1.73□□□□□ -2.13
CX3CR1P49238 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.73□□□□□ -2.13
CX3CR1P49238 CR383656.8-201ENST00000549046 145 ntBASIC1.73□□□□□ -2.13
CX3CR1P49238 MIR4299-201ENST00000577899 72 ntBASIC1.73□□□□□ -2.13
CX3CR1P49238 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.73□□□□□ -2.13
CX3CR1P49238 MIR4435-1-201ENST00000582552 80 ntBASIC1.73□□□□□ -2.13
CX3CR1P49238 AL109918.3-201ENST00000603072 338 ntBASIC1.73□□□□□ -2.13
CX3CR1P49238 AL096840.1-201ENST00000603287 93 ntBASIC1.73□□□□□ -2.13
CX3CR1P49238 SNRPGP17-201ENST00000603780 214 ntBASIC1.73□□□□□ -2.13
CX3CR1P49238 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.73□□□□□ -2.13
CX3CR1P49238 AL133173.2-201ENST00000614270 90 ntBASIC1.73□□□□□ -2.13
CX3CR1P49238 AC008250.2-201ENST00000615261 205 ntBASIC1.73□□□□□ -2.13
CX3CR1P49238 AC008555.8-201ENST00000623602 2168 ntBASIC1.73□□□□□ -2.13
CX3CR1P49238 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
CX3CR1P49238 AP006437.1-201ENST00000641440 3685 ntBASIC1.72□□□□□ -2.13
CX3CR1P49238 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
CX3CR1P49238 RNU6-384P-201ENST00000364900 104 ntBASIC1.72□□□□□ -2.13
CX3CR1P49238 RNU5A-2P-201ENST00000384337 116 ntBASIC1.72□□□□□ -2.13
CX3CR1P49238 MIR10A-201ENST00000385043 110 ntBASIC1.72□□□□□ -2.13
CX3CR1P49238 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
CX3CR1P49238 RNU2-39P-201ENST00000410604 198 ntBASIC1.72□□□□□ -2.13
CX3CR1P49238 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC1.72□□□□□ -2.13
CX3CR1P49238 MTND3P17-201ENST00000416968 344 ntBASIC1.72□□□□□ -2.13
CX3CR1P49238 HMGN2P19-201ENST00000425149 265 ntBASIC1.72□□□□□ -2.13
CX3CR1P49238 MED13P1-201ENST00000428342 171 ntBASIC1.72□□□□□ -2.13
CX3CR1P49238 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.72□□□□□ -2.13
CX3CR1P49238 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.72□□□□□ -2.13
CX3CR1P49238 RPS6P15-201ENST00000431996 751 ntBASIC1.72□□□□□ -2.13
CX3CR1P49238 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.72□□□□□ -2.13
CX3CR1P49238 CALM1P1-201ENST00000442082 433 ntBASIC1.72□□□□□ -2.13
CX3CR1P49238 AL360271.2-201ENST00000447710 161 ntBASIC1.72□□□□□ -2.13
CX3CR1P49238 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.72□□□□□ -2.13
CX3CR1P49238 AC006512.1-201ENST00000468816 291 ntBASIC1.72□□□□□ -2.13
CX3CR1P49238 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.72□□□□□ -2.13
CX3CR1P49238 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.72□□□□□ -2.13
CX3CR1P49238 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.72□□□□□ -2.13
CX3CR1P49238 AP004607.1-201ENST00000524456 203 ntBASIC1.72□□□□□ -2.13
CX3CR1P49238 CYCSP27-201ENST00000527643 293 ntBASIC1.72□□□□□ -2.13
CX3CR1P49238 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.72□□□□□ -2.13
CX3CR1P49238 ADI1P3-201ENST00000549509 470 ntBASIC1.72□□□□□ -2.13
CX3CR1P49238 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.72□□□□□ -2.13
CX3CR1P49238 MIR5089-201ENST00000580047 84 ntBASIC1.72□□□□□ -2.13
CX3CR1P49238 AC243960.4-201ENST00000600532 288 ntBASIC1.72□□□□□ -2.13
CX3CR1P49238 CLIC4P2-201ENST00000601934 717 ntBASIC1.72□□□□□ -2.13
CX3CR1P49238 Z94722.1-201ENST00000604328 474 ntBASIC1.72□□□□□ -2.13
CX3CR1P49238 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
CX3CR1P49238 U6.42-201ENST00000618440 107 ntBASIC1.72□□□□□ -2.13
CX3CR1P49238 AL590808.1-201ENST00000618696 141 ntBASIC1.72□□□□□ -2.13
CX3CR1P49238 AL359740.1-201ENST00000624340 592 ntBASIC1.72□□□□□ -2.13
CX3CR1P49238 AC064859.1-201ENST00000624741 174 ntBASIC1.72□□□□□ -2.13
CX3CR1P49238 AC090517.3-201ENST00000625170 141 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms