Protein–RNA interactions for Protein: P48380

RFX3, Transcription factor RFX3, humanhuman

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3P48380 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.81□□□□□ -2.12
RFX3P48380 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
RFX3P48380 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC1.81□□□□□ -2.12
RFX3P48380 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.81□□□□□ -2.12
RFX3P48380 MIR548AC-201ENST00000585049 88 ntBASIC1.81□□□□□ -2.12
RFX3P48380 BNIP3P8-201ENST00000597863 560 ntBASIC1.81□□□□□ -2.12
RFX3P48380 AC012065.4-201ENST00000602445 679 ntBASIC1.81□□□□□ -2.12
RFX3P48380 AL158032.1-201ENST00000605401 106 ntBASIC1.81□□□□□ -2.12
RFX3P48380 AC126118.1-201ENST00000607744 628 ntBASIC1.81□□□□□ -2.12
RFX3P48380 AC091304.9-201ENST00000612091 226 ntBASIC1.81□□□□□ -2.12
RFX3P48380 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.81□□□□□ -2.12
RFX3P48380 AF246928.1-201ENST00000623768 87 ntBASIC1.81□□□□□ -2.12
RFX3P48380 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
RFX3P48380 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.81□□□□□ -2.12
RFX3P48380 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
RFX3P48380 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
RFX3P48380 RNU6-942P-201ENST00000363002 107 ntBASIC1.8□□□□□ -2.12
RFX3P48380 RNU6-487P-201ENST00000365430 104 ntBASIC1.8□□□□□ -2.12
RFX3P48380 MIR518A2-201ENST00000384966 87 ntBASIC1.8□□□□□ -2.12
RFX3P48380 AL512604.1-201ENST00000404812 257 ntBASIC1.8□□□□□ -2.12
RFX3P48380 AC114491.1-201ENST00000416095 246 ntBASIC1.8□□□□□ -2.12
RFX3P48380 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC1.8□□□□□ -2.12
RFX3P48380 MTND6P13-201ENST00000443510 523 ntBASIC1.8□□□□□ -2.12
RFX3P48380 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.8□□□□□ -2.12
RFX3P48380 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.8□□□□□ -2.12
RFX3P48380 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.8□□□□□ -2.12
RFX3P48380 RPL21P99-201ENST00000480369 423 ntBASIC1.8□□□□□ -2.12
RFX3P48380 RNU6-123P-201ENST00000516163 102 ntBASIC1.8□□□□□ -2.12
RFX3P48380 AC109329.1-201ENST00000518744 317 ntBASIC1.8□□□□□ -2.12
RFX3P48380 AC022616.3-201ENST00000523940 148 ntBASIC1.8□□□□□ -2.12
RFX3P48380 AP004607.1-201ENST00000524456 203 ntBASIC1.8□□□□□ -2.12
RFX3P48380 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.8□□□□□ -2.12
RFX3P48380 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.8□□□□□ -2.12
RFX3P48380 AL353778.1-201ENST00000603149 408 ntBASIC1.8□□□□□ -2.12
RFX3P48380 ELOCP5-201ENST00000604924 333 ntBASIC1.8□□□□□ -2.12
RFX3P48380 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC1.8□□□□□ -2.12
RFX3P48380 AC093788.1-201ENST00000609356 927 ntBASIC1.8□□□□□ -2.12
RFX3P48380 AL627230.6-201ENST00000611129 280 ntBASIC1.8□□□□□ -2.12
RFX3P48380 AC008121.3-201ENST00000618726 433 ntBASIC1.8□□□□□ -2.12
RFX3P48380 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
RFX3P48380 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
RFX3P48380 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.79□□□□□ -2.12
RFX3P48380 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.79□□□□□ -2.12
RFX3P48380 RNA5SP432-201ENST00000362480 116 ntBASIC1.79□□□□□ -2.12
RFX3P48380 SNORD3E-201ENST00000362899 217 ntBASIC1.79□□□□□ -2.12
RFX3P48380 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
RFX3P48380 SNORA20.2-201ENST00000383922 131 ntBASIC1.79□□□□□ -2.12
RFX3P48380 RNU6-641P-201ENST00000384006 107 ntBASIC1.79□□□□□ -2.12
RFX3P48380 SNORA24.1-201ENST00000384401 135 ntBASIC1.79□□□□□ -2.12
RFX3P48380 RNU1-57P-201ENST00000384491 166 ntBASIC1.79□□□□□ -2.12
RFX3P48380 RNA5SP489-201ENST00000410986 109 ntBASIC1.79□□□□□ -2.12
RFX3P48380 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.79□□□□□ -2.12
RFX3P48380 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC1.79□□□□□ -2.12
RFX3P48380 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.79□□□□□ -2.12
RFX3P48380 CALM2P2-201ENST00000428512 440 ntBASIC1.79□□□□□ -2.12
RFX3P48380 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.79□□□□□ -2.12
RFX3P48380 AC012308.1-201ENST00000451232 178 ntBASIC1.79□□□□□ -2.12
RFX3P48380 AC006026.2-201ENST00000457376 180 ntBASIC1.79□□□□□ -2.12
RFX3P48380 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.79□□□□□ -2.12
RFX3P48380 snoU109.2-201ENST00000459316 135 ntBASIC1.79□□□□□ -2.12
RFX3P48380 RPL23AP42-201ENST00000471152 471 ntBASIC1.79□□□□□ -2.12
RFX3P48380 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.79□□□□□ -2.12
RFX3P48380 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.79□□□□□ -2.12
RFX3P48380 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.79□□□□□ -2.12
RFX3P48380 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.79□□□□□ -2.12
RFX3P48380 AC112206.3-201ENST00000514578 389 ntBASIC1.79□□□□□ -2.12
RFX3P48380 RNU2-46P-201ENST00000517038 113 ntBASIC1.79□□□□□ -2.12
RFX3P48380 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.79□□□□□ -2.12
RFX3P48380 CR383656.8-201ENST00000549046 145 ntBASIC1.79□□□□□ -2.12
RFX3P48380 AC093249.1-201ENST00000567049 203 ntBASIC1.79□□□□□ -2.12
RFX3P48380 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.79□□□□□ -2.12
RFX3P48380 MTCYBP33-201ENST00000575007 1130 ntBASIC1.79□□□□□ -2.12
RFX3P48380 MTATP6P24-201ENST00000576835 677 ntBASIC1.79□□□□□ -2.12
RFX3P48380 AL096840.1-201ENST00000603287 93 ntBASIC1.79□□□□□ -2.12
RFX3P48380 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.79□□□□□ -2.12
RFX3P48380 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.79□□□□□ -2.12
RFX3P48380 AL603755.1-201ENST00000619504 163 ntBASIC1.79□□□□□ -2.12
RFX3P48380 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.79□□□□□ -2.12
RFX3P48380 AC138649.3-201ENST00000622154 254 ntBASIC1.79□□□□□ -2.12
RFX3P48380 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.79□□□□□ -2.12
RFX3P48380 SCARNA4-202ENST00000625402 129 ntBASIC1.79□□□□□ -2.12
RFX3P48380 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.79□□□□□ -2.12
RFX3P48380 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.79□□□□□ -2.12
RFX3P48380 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
RFX3P48380 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
RFX3P48380 Y_RNA.22-201ENST00000362492 102 ntBASIC1.78□□□□□ -2.12
RFX3P48380 RNU6-1010P-201ENST00000362757 107 ntBASIC1.78□□□□□ -2.12
RFX3P48380 RNU6-72P-201ENST00000384285 79 ntBASIC1.78□□□□□ -2.12
RFX3P48380 RNU6-843P-201ENST00000384454 104 ntBASIC1.78□□□□□ -2.12
RFX3P48380 CISD1P1-201ENST00000393907 327 ntBASIC1.78□□□□□ -2.12
RFX3P48380 RNU2-2P-201ENST00000410396 191 ntBASIC1.78□□□□□ -2.12
RFX3P48380 RPS3AP3-201ENST00000411933 242 ntBASIC1.78□□□□□ -2.12
RFX3P48380 AC138623.1-201ENST00000418060 216 ntBASIC1.78□□□□□ -2.12
RFX3P48380 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.78□□□□□ -2.12
RFX3P48380 MTCYBP5-201ENST00000423752 1135 ntBASIC1.78□□□□□ -2.12
RFX3P48380 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.78□□□□□ -2.12
RFX3P48380 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.78□□□□□ -2.12
RFX3P48380 AL353689.1-201ENST00000438895 199 ntBASIC1.78□□□□□ -2.12
RFX3P48380 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.78□□□□□ -2.12
RFX3P48380 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms