Protein–RNA interactions for Protein: P0CG47

UBB, Polyubiquitin-B, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP0CG47 AL669831.1-202ENST00000428504 417 ntBASIC0.94□□□□□ -2.26
UBBP0CG47 TIMM9P1-201ENST00000436122 256 ntBASIC0.94□□□□□ -2.26
UBBP0CG47 snoU13.9-201ENST00000458927 103 ntBASIC0.94□□□□□ -2.26
UBBP0CG47 AC108729.1-201ENST00000487812 947 ntBASIC0.94□□□□□ -2.26
UBBP0CG47 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC0.94□□□□□ -2.26
UBBP0CG47 RNA5SP216-201ENST00000516111 123 ntBASIC0.94□□□□□ -2.26
UBBP0CG47 RNVU1-2-201ENST00000516326 135 ntBASIC0.94□□□□□ -2.26
UBBP0CG47 AC010376.1-201ENST00000522101 334 ntBASIC0.94□□□□□ -2.26
UBBP0CG47 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC0.94□□□□□ -2.26
UBBP0CG47 AP003168.1-201ENST00000530091 307 ntBASIC0.94□□□□□ -2.26
UBBP0CG47 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.94□□□□□ -2.26
UBBP0CG47 DNAJC19P9-201ENST00000555084 351 ntBASIC0.94□□□□□ -2.26
UBBP0CG47 AC009712.1-201ENST00000564938 316 ntBASIC0.94□□□□□ -2.26
UBBP0CG47 MTND3P19-201ENST00000603825 345 ntBASIC0.94□□□□□ -2.26
UBBP0CG47 AL022154.1-201ENST00000604698 785 ntBASIC0.94□□□□□ -2.26
UBBP0CG47 AC112220.3-201ENST00000605502 502 ntBASIC0.94□□□□□ -2.26
UBBP0CG47 AC022893.3-201ENST00000607665 437 ntBASIC0.94□□□□□ -2.26
UBBP0CG47 AC097468.3-201ENST00000607956 456 ntBASIC0.94□□□□□ -2.26
UBBP0CG47 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC0.94□□□□□ -2.26
UBBP0CG47 uc_338.15-201ENST00000615470 191 ntBASIC0.94□□□□□ -2.26
UBBP0CG47 AC092656.1-203ENST00000624134 423 ntBASIC0.94□□□□□ -2.26
UBBP0CG47 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC0.94□□□□□ -2.26
UBBP0CG47 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
UBBP0CG47 SNORA7.1-201ENST00000363750 139 ntBASIC0.93□□□□□ -2.26
UBBP0CG47 RNU6-546P-201ENST00000383991 107 ntBASIC0.93□□□□□ -2.26
UBBP0CG47 MIR301A-201ENST00000385261 86 ntBASIC0.93□□□□□ -2.26
UBBP0CG47 PIGPP2-201ENST00000411569 458 ntBASIC0.93□□□□□ -2.26
UBBP0CG47 AC019070.1-201ENST00000415008 1024 ntBASIC0.93□□□□□ -2.26
UBBP0CG47 VPS26BP1-201ENST00000417155 755 ntBASIC0.93□□□□□ -2.26
UBBP0CG47 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.93□□□□□ -2.26
UBBP0CG47 AL591212.2-201ENST00000433923 257 ntBASIC0.93□□□□□ -2.26
UBBP0CG47 AC007327.1-201ENST00000447461 264 ntBASIC0.93□□□□□ -2.26
UBBP0CG47 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC0.93□□□□□ -2.26
UBBP0CG47 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
UBBP0CG47 AL353752.1-201ENST00000454946 260 ntBASIC0.93□□□□□ -2.26
UBBP0CG47 AC108059.3-201ENST00000456388 214 ntBASIC0.93□□□□□ -2.26
UBBP0CG47 SNORA19.3-201ENST00000516165 130 ntBASIC0.93□□□□□ -2.26
UBBP0CG47 AP005660.1-201ENST00000522972 293 ntBASIC0.93□□□□□ -2.26
UBBP0CG47 LRRC6P1-201ENST00000532188 885 ntBASIC0.93□□□□□ -2.26
UBBP0CG47 MTND4LP25-201ENST00000570218 163 ntBASIC0.93□□□□□ -2.26
UBBP0CG47 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC0.93□□□□□ -2.26
UBBP0CG47 MIR1273C-201ENST00000578669 77 ntBASIC0.93□□□□□ -2.26
UBBP0CG47 MIR544B-201ENST00000582372 78 ntBASIC0.93□□□□□ -2.26
UBBP0CG47 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC0.93□□□□□ -2.26
UBBP0CG47 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC0.93□□□□□ -2.26
UBBP0CG47 AC130324.3-201ENST00000614165 542 ntBASIC0.93□□□□□ -2.26
UBBP0CG47 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.93□□□□□ -2.26
UBBP0CG47 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC0.93□□□□□ -2.26
UBBP0CG47 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
UBBP0CG47 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.92□□□□□ -2.26
UBBP0CG47 Y_RNA.33-201ENST00000362591 102 ntBASIC0.92□□□□□ -2.26
UBBP0CG47 RNU1-17P-201ENST00000363022 152 ntBASIC0.92□□□□□ -2.26
UBBP0CG47 RNU6-457P-201ENST00000363999 107 ntBASIC0.92□□□□□ -2.26
UBBP0CG47 CBX3P9-201ENST00000402326 552 ntBASIC0.92□□□□□ -2.26
UBBP0CG47 RNU2-23P-201ENST00000410545 195 ntBASIC0.92□□□□□ -2.26
UBBP0CG47 MTND4P25-201ENST00000441039 533 ntBASIC0.92□□□□□ -2.26
UBBP0CG47 MTND2P4-201ENST00000445034 1004 ntBASIC0.92□□□□□ -2.26
UBBP0CG47 AC245102.2-201ENST00000448956 180 ntBASIC0.92□□□□□ -2.26
UBBP0CG47 AL583843.1-201ENST00000456070 346 ntBASIC0.92□□□□□ -2.26
UBBP0CG47 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC0.92□□□□□ -2.26
UBBP0CG47 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.92□□□□□ -2.26
UBBP0CG47 AC116353.3-201ENST00000511215 249 ntBASIC0.92□□□□□ -2.26
UBBP0CG47 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC0.92□□□□□ -2.26
UBBP0CG47 AP000907.2-201ENST00000530827 353 ntBASIC0.92□□□□□ -2.26
UBBP0CG47 AC092451.2-201ENST00000538746 658 ntBASIC0.92□□□□□ -2.26
UBBP0CG47 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.92□□□□□ -2.26
UBBP0CG47 AC092325.1-201ENST00000566449 554 ntBASIC0.92□□□□□ -2.26
UBBP0CG47 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.92□□□□□ -2.26
UBBP0CG47 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
UBBP0CG47 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC0.92□□□□□ -2.26
UBBP0CG47 VN1R82P-201ENST00000601481 356 ntBASIC0.92□□□□□ -2.26
UBBP0CG47 AC004908.3-201ENST00000610248 625 ntBASIC0.92□□□□□ -2.26
UBBP0CG47 RNU6-1192P-201ENST00000612197 107 ntBASIC0.92□□□□□ -2.26
UBBP0CG47 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC0.92□□□□□ -2.26
UBBP0CG47 AC092140.2-201ENST00000618027 521 ntBASIC0.92□□□□□ -2.26
UBBP0CG47 RNU6-489P-201ENST00000618289 107 ntBASIC0.92□□□□□ -2.26
UBBP0CG47 AL159153.1-201ENST00000619688 317 ntBASIC0.92□□□□□ -2.26
UBBP0CG47 AL353770.2-201ENST00000620024 78 ntBASIC0.92□□□□□ -2.26
UBBP0CG47 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
UBBP0CG47 AC093648.1-201ENST00000623546 606 ntBASIC0.92□□□□□ -2.26
UBBP0CG47 MIR3529-201ENST00000637713 78 ntBASIC0.92□□□□□ -2.26
UBBP0CG47 AC241585.2-209ENST00000638217 143 ntBASIC0.92□□□□□ -2.26
UBBP0CG47 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
UBBP0CG47 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC0.91□□□□□ -2.26
UBBP0CG47 MIR302D-201ENST00000362275 68 ntBASIC0.91□□□□□ -2.26
UBBP0CG47 RNU6-655P-201ENST00000362858 107 ntBASIC0.91□□□□□ -2.26
UBBP0CG47 RNU6-1210P-201ENST00000363775 107 ntBASIC0.91□□□□□ -2.26
UBBP0CG47 RNU6-72P-201ENST00000384285 79 ntBASIC0.91□□□□□ -2.26
UBBP0CG47 SNORD116-12-201ENST00000384468 92 ntBASIC0.91□□□□□ -2.26
UBBP0CG47 RPL23AP36-201ENST00000413895 458 ntBASIC0.91□□□□□ -2.26
UBBP0CG47 UBE2V1P10-201ENST00000414685 269 ntBASIC0.91□□□□□ -2.26
UBBP0CG47 AL031779.1-201ENST00000415663 330 ntBASIC0.91□□□□□ -2.26
UBBP0CG47 AL365338.1-201ENST00000422282 858 ntBASIC0.91□□□□□ -2.26
UBBP0CG47 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC0.91□□□□□ -2.26
UBBP0CG47 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC0.91□□□□□ -2.26
UBBP0CG47 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC0.91□□□□□ -2.26
UBBP0CG47 CALM1P1-201ENST00000442082 433 ntBASIC0.91□□□□□ -2.26
UBBP0CG47 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC0.91□□□□□ -2.26
UBBP0CG47 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC0.91□□□□□ -2.26
UBBP0CG47 FDX1P2-201ENST00000450769 375 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 124.6 ms