Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 AC025588.2-201ENST00000604851 466 ntBASIC1.23□□□□□ -2.21
COL4A2P08572 AC103706.2-201ENST00000638080 240 ntBASIC1.23□□□□□ -2.21
COL4A2P08572 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.23□□□□□ -2.21
COL4A2P08572 Z75746.1-201ENST00000440243 2080 ntBASIC1.23□□□□□ -2.21
COL4A2P08572 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.22□□□□□ -2.21
COL4A2P08572 RNU6-433P-201ENST00000363216 104 ntBASIC1.22□□□□□ -2.21
COL4A2P08572 RNU6-898P-201ENST00000365627 104 ntBASIC1.22□□□□□ -2.21
COL4A2P08572 SMIM11P1-201ENST00000369586 178 ntBASIC1.22□□□□□ -2.21
COL4A2P08572 MIR147B-201ENST00000390185 80 ntBASIC1.22□□□□□ -2.21
COL4A2P08572 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
COL4A2P08572 SNORA40C-201ENST00000391285 128 ntBASIC1.22□□□□□ -2.21
COL4A2P08572 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC1.22□□□□□ -2.21
COL4A2P08572 RPS20P2-201ENST00000402520 389 ntBASIC1.22□□□□□ -2.21
COL4A2P08572 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.22□□□□□ -2.21
COL4A2P08572 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC1.22□□□□□ -2.21
COL4A2P08572 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.22□□□□□ -2.21
COL4A2P08572 BTF3P15-201ENST00000455606 336 ntBASIC1.22□□□□□ -2.21
COL4A2P08572 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC1.22□□□□□ -2.21
COL4A2P08572 MTND1P3-201ENST00000484956 952 ntBASIC1.22□□□□□ -2.21
COL4A2P08572 RPS27P21-201ENST00000486977 252 ntBASIC1.22□□□□□ -2.21
COL4A2P08572 TPT1P8-201ENST00000510120 555 ntBASIC1.22□□□□□ -2.21
COL4A2P08572 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.22□□□□□ -2.21
COL4A2P08572 AC116347.2-201ENST00000514912 523 ntBASIC1.22□□□□□ -2.21
COL4A2P08572 SNORA25.11-201ENST00000515935 105 ntBASIC1.22□□□□□ -2.21
COL4A2P08572 AC109329.1-201ENST00000518744 317 ntBASIC1.22□□□□□ -2.21
COL4A2P08572 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.22□□□□□ -2.21
COL4A2P08572 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC1.22□□□□□ -2.21
COL4A2P08572 MIR4307-201ENST00000582802 84 ntBASIC1.22□□□□□ -2.21
COL4A2P08572 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC1.22□□□□□ -2.21
COL4A2P08572 MTCYBP22-201ENST00000603788 447 ntBASIC1.22□□□□□ -2.21
COL4A2P08572 AL355598.1-201ENST00000604169 202 ntBASIC1.22□□□□□ -2.21
COL4A2P08572 AC024581.2-201ENST00000619986 252 ntBASIC1.22□□□□□ -2.21
COL4A2P08572 AL607023.1-201ENST00000620045 248 ntBASIC1.22□□□□□ -2.21
COL4A2P08572 AP003400.5-201ENST00000624827 617 ntBASIC1.22□□□□□ -2.21
COL4A2P08572 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC1.22□□□□□ -2.21
COL4A2P08572 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.22□□□□□ -2.21
COL4A2P08572 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
COL4A2P08572 SNORD114-19-201ENST00000363072 75 ntBASIC1.21□□□□□ -2.22
COL4A2P08572 MIR222-201ENST00000384992 110 ntBASIC1.21□□□□□ -2.22
COL4A2P08572 MIR301A-201ENST00000385261 86 ntBASIC1.21□□□□□ -2.22
COL4A2P08572 NDUFS5P1-201ENST00000405668 289 ntBASIC1.21□□□□□ -2.22
COL4A2P08572 MIR548J-201ENST00000408833 112 ntBASIC1.21□□□□□ -2.22
COL4A2P08572 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.21□□□□□ -2.22
COL4A2P08572 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.21□□□□□ -2.22
COL4A2P08572 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.21□□□□□ -2.22
COL4A2P08572 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.21□□□□□ -2.22
COL4A2P08572 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1.21□□□□□ -2.22
COL4A2P08572 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC1.21□□□□□ -2.22
COL4A2P08572 MTCYBP39-201ENST00000437562 491 ntBASIC1.21□□□□□ -2.22
COL4A2P08572 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.21□□□□□ -2.22
COL4A2P08572 AL354941.1-201ENST00000438600 464 ntBASIC1.21□□□□□ -2.22
COL4A2P08572 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.21□□□□□ -2.22
COL4A2P08572 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.21□□□□□ -2.22
COL4A2P08572 AL139824.2-201ENST00000458731 1095 ntBASIC1.21□□□□□ -2.22
COL4A2P08572 AC087343.1-201ENST00000477341 475 ntBASIC1.21□□□□□ -2.22
COL4A2P08572 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC1.21□□□□□ -2.22
COL4A2P08572 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.21□□□□□ -2.22
COL4A2P08572 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.21□□□□□ -2.22
COL4A2P08572 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.21□□□□□ -2.22
COL4A2P08572 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.21□□□□□ -2.22
COL4A2P08572 AC107934.1-201ENST00000522215 217 ntBASIC1.21□□□□□ -2.22
COL4A2P08572 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC1.21□□□□□ -2.22
COL4A2P08572 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.21□□□□□ -2.22
COL4A2P08572 AC123904.2-201ENST00000548059 300 ntBASIC1.21□□□□□ -2.22
COL4A2P08572 ELOCP32-201ENST00000548625 324 ntBASIC1.21□□□□□ -2.22
COL4A2P08572 AC006199.1-201ENST00000548728 219 ntBASIC1.21□□□□□ -2.22
COL4A2P08572 CR383656.8-201ENST00000549046 145 ntBASIC1.21□□□□□ -2.22
COL4A2P08572 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC1.21□□□□□ -2.22
COL4A2P08572 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC1.21□□□□□ -2.22
COL4A2P08572 AC024619.4-201ENST00000580924 316 ntBASIC1.21□□□□□ -2.22
COL4A2P08572 MIR3118-1-201ENST00000581787 76 ntBASIC1.21□□□□□ -2.22
COL4A2P08572 BNIP3P40-201ENST00000596017 556 ntBASIC1.21□□□□□ -2.22
COL4A2P08572 AL358072.1-201ENST00000604156 575 ntBASIC1.21□□□□□ -2.22
COL4A2P08572 AL450336.1-201ENST00000605180 586 ntBASIC1.21□□□□□ -2.22
COL4A2P08572 AC130324.3-201ENST00000614165 542 ntBASIC1.21□□□□□ -2.22
COL4A2P08572 U6.42-201ENST00000618440 107 ntBASIC1.21□□□□□ -2.22
COL4A2P08572 AL078595.3-201ENST00000623815 1166 ntBASIC1.21□□□□□ -2.22
COL4A2P08572 AC007490.1-201ENST00000624321 703 ntBASIC1.21□□□□□ -2.22
COL4A2P08572 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC1.21□□□□□ -2.22
COL4A2P08572 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.21□□□□□ -2.22
COL4A2P08572 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
COL4A2P08572 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.21□□□□□ -2.22
COL4A2P08572 AC073343.1-201ENST00000328239 651 ntBASIC1.2□□□□□ -2.22
COL4A2P08572 Y_RNA.36-201ENST00000362602 112 ntBASIC1.2□□□□□ -2.22
COL4A2P08572 Y_RNA.178-201ENST00000363832 102 ntBASIC1.2□□□□□ -2.22
COL4A2P08572 SNORA3A-201ENST00000364113 130 ntBASIC1.2□□□□□ -2.22
COL4A2P08572 RNU6-188P-201ENST00000364207 107 ntBASIC1.2□□□□□ -2.22
COL4A2P08572 RNU4-91P-201ENST00000364778 135 ntBASIC1.2□□□□□ -2.22
COL4A2P08572 Y_RNA.302-201ENST00000364997 102 ntBASIC1.2□□□□□ -2.22
COL4A2P08572 FCF1P10-201ENST00000407590 479 ntBASIC1.2□□□□□ -2.22
COL4A2P08572 SRIP3-201ENST00000413200 219 ntBASIC1.2□□□□□ -2.22
COL4A2P08572 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.2□□□□□ -2.22
COL4A2P08572 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC1.2□□□□□ -2.22
COL4A2P08572 RPL22P17-201ENST00000438729 315 ntBASIC1.2□□□□□ -2.22
COL4A2P08572 KATNBL1P3-201ENST00000443475 909 ntBASIC1.2□□□□□ -2.22
COL4A2P08572 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.2□□□□□ -2.22
COL4A2P08572 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.2□□□□□ -2.22
COL4A2P08572 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.2□□□□□ -2.22
COL4A2P08572 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC1.2□□□□□ -2.22
COL4A2P08572 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms