| MT1A | P04731 | AL109811.3-202 | ENST00000612387 | 651 nt | TSL 3 BASIC | -0.16 | □□□□□ -2.44 | | |
| MT1A | P04731 | AC068506.1-202 | ENST00000613388 | 545 nt | TSL 3 BASIC | -0.16 | □□□□□ -2.44 | | |
| MT1A | P04731 | U6.48-201 | ENST00000618523 | 106 nt | BASIC | -0.16 | □□□□□ -2.44 | | |
| MT1A | P04731 | AC012361.1-201 | ENST00000447260 | 1498 nt | TSL 1 (best) BASIC | -0.16 | □□□□□ -2.44 | | |
| MT1A | P04731 | ZNF404-201 | ENST00000324394 | 1844 nt | APPRIS ALT2 TSL 1 (best) BASIC | -0.17 | □□□□□ -2.44 | | |
| MT1A | P04731 | Y_RNA.30-201 | ENST00000362572 | 97 nt | BASIC | -0.17 | □□□□□ -2.44 | | |
| MT1A | P04731 | SNORD114-5-201 | ENST00000362928 | 70 nt | BASIC | -0.17 | □□□□□ -2.44 | | |
| MT1A | P04731 | RNU6-833P-201 | ENST00000363486 | 107 nt | BASIC | -0.17 | □□□□□ -2.44 | | |
| MT1A | P04731 | KIF27-203 | ENST00000376347 | 1030 nt | TSL 5 BASIC | -0.17 | □□□□□ -2.44 | | |
| MT1A | P04731 | TAF9BP2-201 | ENST00000400856 | 499 nt | BASIC | -0.17 | □□□□□ -2.44 | | |
| MT1A | P04731 | RNU6ATAC8P-201 | ENST00000408460 | 126 nt | BASIC | -0.17 | □□□□□ -2.44 | | |
| MT1A | P04731 | MIR1290-201 | ENST00000408735 | 78 nt | BASIC | -0.17 | □□□□□ -2.44 | | |
| MT1A | P04731 | AL663023.1-201 | ENST00000412932 | 853 nt | TSL 3 BASIC | -0.17 | □□□□□ -2.44 | | |
| MT1A | P04731 | AL353777.1-201 | ENST00000425552 | 326 nt | BASIC | -0.17 | □□□□□ -2.44 | | |
| MT1A | P04731 | SNRPEP9-201 | ENST00000436794 | 238 nt | BASIC | -0.17 | □□□□□ -2.44 | | |
| MT1A | P04731 | YWHAZP8-201 | ENST00000436935 | 731 nt | BASIC | -0.17 | □□□□□ -2.44 | | |
| MT1A | P04731 | AL390879.2-204 | ENST00000438602 | 582 nt | TSL 3 BASIC | -0.17 | □□□□□ -2.44 | | |
| MT1A | P04731 | AL592447.1-201 | ENST00000447592 | 540 nt | BASIC | -0.17 | □□□□□ -2.44 | | |
| MT1A | P04731 | AL356270.1-201 | ENST00000456587 | 522 nt | TSL 3 BASIC | -0.17 | □□□□□ -2.44 | | |
| MT1A | P04731 | LINC01473-203 | ENST00000456653 | 1079 nt | TSL 3 BASIC | -0.17 | □□□□□ -2.44 | | |
| MT1A | P04731 | AC091976.1-202 | ENST00000509211 | 630 nt | TSL 3 BASIC | -0.17 | □□□□□ -2.44 | | |
| MT1A | P04731 | RNU6-1282P-201 | ENST00000516735 | 96 nt | BASIC | -0.17 | □□□□□ -2.44 | | |
| MT1A | P04731 | AC067904.2-201 | ENST00000517322 | 1283 nt | BASIC | -0.17 | □□□□□ -2.44 | | |
| MT1A | P04731 | AC008562.1-201 | ENST00000521763 | 330 nt | BASIC | -0.17 | □□□□□ -2.44 | | |
| MT1A | P04731 | HTN3-202 | ENST00000526767 | 578 nt | APPRIS P2 TSL 1 (best) BASIC | -0.17 | □□□□□ -2.44 | | |
| MT1A | P04731 | AC124293.1-201 | ENST00000530034 | 493 nt | BASIC | -0.17 | □□□□□ -2.44 | | |
| MT1A | P04731 | EEF1B2P4-201 | ENST00000551398 | 348 nt | BASIC | -0.17 | □□□□□ -2.44 | | |
| MT1A | P04731 | NACAP3-201 | ENST00000552100 | 481 nt | BASIC | -0.17 | □□□□□ -2.44 | | |
| MT1A | P04731 | AC009269.4-201 | ENST00000557828 | 440 nt | TSL 3 BASIC | -0.17 | □□□□□ -2.44 | | |
| MT1A | P04731 | EIF1P4-201 | ENST00000572664 | 335 nt | BASIC | -0.17 | □□□□□ -2.44 | | |
| MT1A | P04731 | ABBA01006766.1-201 | ENST00000584728 | 294 nt | BASIC | -0.17 | □□□□□ -2.44 | | |
| MT1A | P04731 | AC091132.5-204 | ENST00000586348 | 630 nt | TSL 3 BASIC | -0.17 | □□□□□ -2.44 | | |
| MT1A | P04731 | ZNF92P3-201 | ENST00000596594 | 954 nt | BASIC | -0.17 | □□□□□ -2.44 | | |
| MT1A | P04731 | AP003465.2-201 | ENST00000602571 | 373 nt | BASIC | -0.17 | □□□□□ -2.44 | | |
| MT1A | P04731 | AC146944.4-201 | ENST00000602697 | 718 nt | BASIC | -0.17 | □□□□□ -2.44 | | |
| MT1A | P04731 | AL391813.1-201 | ENST00000603098 | 260 nt | BASIC | -0.17 | □□□□□ -2.44 | | |
| MT1A | P04731 | AC007349.4-201 | ENST00000608114 | 532 nt | BASIC | -0.17 | □□□□□ -2.44 | | |
| MT1A | P04731 | uc_338.15-201 | ENST00000615470 | 191 nt | BASIC | -0.17 | □□□□□ -2.44 | | |
| MT1A | P04731 | AC090772.4-201 | ENST00000623599 | 362 nt | BASIC | -0.17 | □□□□□ -2.44 | | |
| MT1A | P04731 | AC100810.6-201 | ENST00000638068 | 285 nt | BASIC | -0.17 | □□□□□ -2.44 | | |
| MT1A | P04731 | GYPB-216 | ENST00000638448 | 363 nt | APPRIS P1 TSL 1 (best) BASIC | -0.17 | □□□□□ -2.44 | | |
| MT1A | P04731 | MT-ND4-201 | ENST00000361381 | 1378 nt | APPRIS P1 BASIC | -0.18 | □□□□□ -2.44 | | |
| MT1A | P04731 | SNORD114-31-201 | ENST00000363219 | 75 nt | BASIC | -0.18 | □□□□□ -2.44 | | |
| MT1A | P04731 | RNU6-697P-201 | ENST00000363348 | 107 nt | BASIC | -0.18 | □□□□□ -2.44 | | |
| MT1A | P04731 | SNORD114-9-201 | ENST00000364370 | 72 nt | BASIC | -0.18 | □□□□□ -2.44 | | |
| MT1A | P04731 | RNU6-1335P-201 | ENST00000365426 | 107 nt | BASIC | -0.18 | □□□□□ -2.44 | | |
| MT1A | P04731 | RNY1P8-201 | ENST00000383970 | 114 nt | BASIC | -0.18 | □□□□□ -2.44 | | |
| MT1A | P04731 | RNA5SP219-201 | ENST00000390940 | 113 nt | BASIC | -0.18 | □□□□□ -2.44 | | |
| MT1A | P04731 | CALM2P3-201 | ENST00000400429 | 449 nt | BASIC | -0.18 | □□□□□ -2.44 | | |
| MT1A | P04731 | SNORD99-201 | ENST00000408612 | 74 nt | BASIC | -0.18 | □□□□□ -2.44 | | |
| MT1A | P04731 | RPL26P27-201 | ENST00000414397 | 437 nt | BASIC | -0.18 | □□□□□ -2.44 | | |
| MT1A | P04731 | DSCR4-IT1-201 | ENST00000417138 | 424 nt | TSL 5 BASIC | -0.18 | □□□□□ -2.44 | | |
| MT1A | P04731 | LINC01853-201 | ENST00000417715 | 444 nt | TSL 3 BASIC | -0.18 | □□□□□ -2.44 | | |
| MT1A | P04731 | AC244035.3-201 | ENST00000428399 | 271 nt | TSL 2 BASIC | -0.18 | □□□□□ -2.44 | | |
| MT1A | P04731 | RPL36P19-201 | ENST00000430744 | 301 nt | BASIC | -0.18 | □□□□□ -2.44 | | |
| MT1A | P04731 | ZFAND6P1-201 | ENST00000434138 | 605 nt | BASIC | -0.18 | □□□□□ -2.44 | | |
| MT1A | P04731 | TIMM9P1-201 | ENST00000436122 | 256 nt | BASIC | -0.18 | □□□□□ -2.44 | | |
| MT1A | P04731 | AL603839.2-201 | ENST00000437060 | 546 nt | TSL 5 BASIC | -0.18 | □□□□□ -2.44 | | |
| MT1A | P04731 | RAB11AP1-201 | ENST00000442978 | 646 nt | BASIC | -0.18 | □□□□□ -2.44 | | |
| MT1A | P04731 | AL031313.1-201 | ENST00000448435 | 256 nt | BASIC | -0.18 | □□□□□ -2.44 | | |
| MT1A | P04731 | AL160287.1-201 | ENST00000455612 | 432 nt | TSL 3 BASIC | -0.18 | □□□□□ -2.44 | | |
| MT1A | P04731 | RPL30P6-201 | ENST00000475925 | 342 nt | BASIC | -0.18 | □□□□□ -2.44 | | |
| MT1A | P04731 | NCOR1P1-201 | ENST00000478176 | 406 nt | TSL 1 (best) BASIC | -0.18 | □□□□□ -2.44 | | |
| MT1A | P04731 | VPS26AP1-201 | ENST00000483197 | 979 nt | BASIC | -0.18 | □□□□□ -2.44 | | |
| MT1A | P04731 | AC106821.1-201 | ENST00000502861 | 572 nt | TSL 5 BASIC | -0.18 | □□□□□ -2.44 | | |
| MT1A | P04731 | RPF2P2-201 | ENST00000504693 | 896 nt | BASIC | -0.18 | □□□□□ -2.44 | | |
| MT1A | P04731 | LINC02494-201 | ENST00000509824 | 427 nt | TSL 3 BASIC | -0.18 | □□□□□ -2.44 | | |
| MT1A | P04731 | MIR449C-201 | ENST00000516047 | 92 nt | BASIC | -0.18 | □□□□□ -2.44 | | |
| MT1A | P04731 | Y_RNA.681-201 | ENST00000516445 | 113 nt | BASIC | -0.18 | □□□□□ -2.44 | | |
| MT1A | P04731 | LINC02398-201 | ENST00000536666 | 431 nt | TSL 3 BASIC | -0.18 | □□□□□ -2.44 | | |
| MT1A | P04731 | AL158211.1-201 | ENST00000566763 | 763 nt | BASIC | -0.18 | □□□□□ -2.44 | | |
| MT1A | P04731 | ADAM3B-201 | ENST00000569937 | 840 nt | BASIC | -0.18 | □□□□□ -2.44 | | |
| MT1A | P04731 | AC015688.6-201 | ENST00000577737 | 104 nt | BASIC | -0.18 | □□□□□ -2.44 | | |
| MT1A | P04731 | MIR3664-201 | ENST00000579074 | 99 nt | BASIC | -0.18 | □□□□□ -2.44 | | |
| MT1A | P04731 | BPTFP1-201 | ENST00000579209 | 492 nt | BASIC | -0.18 | □□□□□ -2.44 | | |
| MT1A | P04731 | MIR4764-201 | ENST00000580680 | 88 nt | BASIC | -0.18 | □□□□□ -2.44 | | |
| MT1A | P04731 | AC022960.1-201 | ENST00000582269 | 348 nt | TSL 3 BASIC | -0.18 | □□□□□ -2.44 | | |
| MT1A | P04731 | MIR4645-201 | ENST00000583158 | 77 nt | BASIC | -0.18 | □□□□□ -2.44 | | |
| MT1A | P04731 | MIR4290-201 | ENST00000583807 | 95 nt | BASIC | -0.18 | □□□□□ -2.44 | | |
| MT1A | P04731 | AP002906.1-201 | ENST00000603405 | 233 nt | BASIC | -0.18 | □□□□□ -2.44 | | |
| MT1A | P04731 | AL513534.2-201 | ENST00000603836 | 250 nt | BASIC | -0.18 | □□□□□ -2.44 | | |
| MT1A | P04731 | AL161716.1-201 | ENST00000606365 | 273 nt | TSL 5 BASIC | -0.18 | □□□□□ -2.44 | | |
| MT1A | P04731 | AC004775.1-201 | ENST00000607389 | 753 nt | BASIC | -0.18 | □□□□□ -2.44 | | |
| MT1A | P04731 | AP005229.2-201 | ENST00000609980 | 697 nt | BASIC | -0.18 | □□□□□ -2.44 | | |
| MT1A | P04731 | AC009237.15-201 | ENST00000610252 | 501 nt | BASIC | -0.18 | □□□□□ -2.44 | | |
| MT1A | P04731 | AC090116.1-201 | ENST00000615679 | 446 nt | BASIC | -0.18 | □□□□□ -2.44 | | |
| MT1A | P04731 | AL157786.1-207 | ENST00000627771 | 695 nt | BASIC | -0.18 | □□□□□ -2.44 | | |
| MT1A | P04731 | CDK1-209 | ENST00000614696 | 1884 nt | TSL 5 BASIC | -0.18 | □□□□□ -2.44 | | |
| MT1A | P04731 | SAMSN1-202 | ENST00000400564 | 1382 nt | TSL 1 (best) BASIC | -0.19 | □□□□□ -2.44 | | |
| MT1A | P04731 | RNU4-79P-201 | ENST00000362764 | 141 nt | BASIC | -0.19 | □□□□□ -2.44 | | |
| MT1A | P04731 | RNA5SP214-201 | ENST00000363378 | 118 nt | BASIC | -0.19 | □□□□□ -2.44 | | |
| MT1A | P04731 | RNU6-923P-201 | ENST00000364753 | 107 nt | BASIC | -0.19 | □□□□□ -2.44 | | |
| MT1A | P04731 | MIR95-201 | ENST00000385072 | 81 nt | BASIC | -0.19 | □□□□□ -2.44 | | |
| MT1A | P04731 | SNORD12-201 | ENST00000391002 | 90 nt | BASIC | -0.19 | □□□□□ -2.44 | | |
| MT1A | P04731 | MTATP6P31-201 | ENST00000406985 | 692 nt | BASIC | -0.19 | □□□□□ -2.44 | | |
| MT1A | P04731 | MS4A4E-203 | ENST00000425663 | 350 nt | TSL 1 (best) BASIC | -0.19 | □□□□□ -2.44 | | |
| MT1A | P04731 | LINC01675-201 | ENST00000426519 | 701 nt | TSL 3 BASIC | -0.19 | □□□□□ -2.44 | | |
| MT1A | P04731 | AL590383.1-201 | ENST00000428602 | 75 nt | BASIC | -0.19 | □□□□□ -2.44 | | |
| MT1A | P04731 | AC093423.2-201 | ENST00000429074 | 437 nt | TSL 3 BASIC | -0.19 | □□□□□ -2.44 | | |
| MT1A | P04731 | MTCO1P3-201 | ENST00000429327 | 192 nt | BASIC | -0.19 | □□□□□ -2.44 | | |