Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 RNU6-758P-201ENST00000516292 89 ntBASIC0.26□□□□□ -2.37
RGPD3A6NKT7 RNA5SP291-201ENST00000517222 105 ntBASIC0.26□□□□□ -2.37
RGPD3A6NKT7 ROCK1P1-201ENST00000573767 549 ntBASIC0.26□□□□□ -2.37
RGPD3A6NKT7 AC068790.6-201ENST00000602558 258 ntBASIC0.26□□□□□ -2.37
RGPD3A6NKT7 Z83818.1-201ENST00000603584 150 ntBASIC0.26□□□□□ -2.37
RGPD3A6NKT7 AL138713.1-201ENST00000624026 2130 ntBASIC0.26□□□□□ -2.37
RGPD3A6NKT7 AC008993.2-201ENST00000631744 806 ntBASIC0.26□□□□□ -2.37
RGPD3A6NKT7 U2.21-201ENST00000637295 81 ntBASIC0.26□□□□□ -2.37
RGPD3A6NKT7 ATM-228ENST00000639240 498 ntTSL 5 BASIC0.26□□□□□ -2.37
RGPD3A6NKT7 MIR135A2-201ENST00000384854 100 ntBASIC0.25□□□□□ -2.37
RGPD3A6NKT7 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC0.25□□□□□ -2.37
RGPD3A6NKT7 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.25□□□□□ -2.37
RGPD3A6NKT7 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.25□□□□□ -2.37
RGPD3A6NKT7 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC0.25□□□□□ -2.37
RGPD3A6NKT7 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.25□□□□□ -2.37
RGPD3A6NKT7 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.25□□□□□ -2.37
RGPD3A6NKT7 AC009318.4-201ENST00000620496 486 ntBASIC0.25□□□□□ -2.37
RGPD3A6NKT7 AC009950.2-201ENST00000636548 183 ntBASIC0.25□□□□□ -2.37
RGPD3A6NKT7 SNORD114-24-201ENST00000365029 72 ntBASIC0.24□□□□□ -2.37
RGPD3A6NKT7 RPP40P1-201ENST00000426762 456 ntBASIC0.24□□□□□ -2.37
RGPD3A6NKT7 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC0.24□□□□□ -2.37
RGPD3A6NKT7 GAPDHP17-201ENST00000449858 1001 ntBASIC0.24□□□□□ -2.37
RGPD3A6NKT7 AC067940.1-201ENST00000458411 300 ntBASIC0.24□□□□□ -2.37
RGPD3A6NKT7 RPL31P3-201ENST00000458430 332 ntBASIC0.24□□□□□ -2.37
RGPD3A6NKT7 SUMO1P1-201ENST00000497904 306 ntBASIC0.24□□□□□ -2.37
RGPD3A6NKT7 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC0.24□□□□□ -2.37
RGPD3A6NKT7 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.24□□□□□ -2.37
RGPD3A6NKT7 AC011374.2-201ENST00000607135 526 ntBASIC0.24□□□□□ -2.37
RGPD3A6NKT7 AL357075.2-201ENST00000614906 189 ntBASIC0.24□□□□□ -2.37
RGPD3A6NKT7 AC007490.1-201ENST00000624321 703 ntBASIC0.24□□□□□ -2.37
RGPD3A6NKT7 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
RGPD3A6NKT7 RNU6-1237P-201ENST00000384777 107 ntBASIC0.24□□□□□ -2.37
RGPD3A6NKT7 AL161935.2-201ENST00000414627 60 ntBASIC0.24□□□□□ -2.37
RGPD3A6NKT7 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.24□□□□□ -2.37
RGPD3A6NKT7 HSPE1P9-201ENST00000440046 311 ntBASIC0.24□□□□□ -2.37
RGPD3A6NKT7 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC0.24□□□□□ -2.37
RGPD3A6NKT7 PTP4A1P4-201ENST00000512479 322 ntBASIC0.24□□□□□ -2.37
RGPD3A6NKT7 SNORD116-30-201ENST00000516468 85 ntBASIC0.24□□□□□ -2.37
RGPD3A6NKT7 AP001893.2-201ENST00000526949 202 ntBASIC0.24□□□□□ -2.37
RGPD3A6NKT7 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC0.24□□□□□ -2.37
RGPD3A6NKT7 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC0.24□□□□□ -2.37
RGPD3A6NKT7 MIR4667-201ENST00000578933 66 ntBASIC0.24□□□□□ -2.37
RGPD3A6NKT7 AC008088.1-201ENST00000580993 280 ntBASIC0.24□□□□□ -2.37
RGPD3A6NKT7 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.24□□□□□ -2.37
RGPD3A6NKT7 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC0.24□□□□□ -2.37
RGPD3A6NKT7 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.24□□□□□ -2.37
RGPD3A6NKT7 AL121978.1-201ENST00000402778 359 ntBASIC0.23□□□□□ -2.37
RGPD3A6NKT7 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC0.23□□□□□ -2.37
RGPD3A6NKT7 PTGES3P4-201ENST00000426243 356 ntBASIC0.23□□□□□ -2.37
RGPD3A6NKT7 AC068135.1-201ENST00000446164 246 ntBASIC0.23□□□□□ -2.37
RGPD3A6NKT7 ZNF705CP-201ENST00000530515 889 ntBASIC0.23□□□□□ -2.37
RGPD3A6NKT7 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC0.23□□□□□ -2.37
RGPD3A6NKT7 BNIP3P27-201ENST00000599991 412 ntBASIC0.23□□□□□ -2.37
RGPD3A6NKT7 AC024257.5-201ENST00000612739 531 ntBASIC0.23□□□□□ -2.37
RGPD3A6NKT7 MIR329-1-201ENST00000385028 80 ntBASIC0.22□□□□□ -2.37
RGPD3A6NKT7 RPL26P27-201ENST00000414397 437 ntBASIC0.22□□□□□ -2.37
RGPD3A6NKT7 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.22□□□□□ -2.37
RGPD3A6NKT7 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC0.22□□□□□ -2.37
RGPD3A6NKT7 RPL26P26-201ENST00000480251 434 ntBASIC0.22□□□□□ -2.37
RGPD3A6NKT7 AC109329.1-201ENST00000518744 317 ntBASIC0.22□□□□□ -2.37
RGPD3A6NKT7 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
RGPD3A6NKT7 AL512310.8-201ENST00000550183 120 ntBASIC0.22□□□□□ -2.37
RGPD3A6NKT7 SNORA4.3-201ENST00000365564 137 ntBASIC0.22□□□□□ -2.37
RGPD3A6NKT7 MIR200A-201ENST00000384875 90 ntBASIC0.22□□□□□ -2.37
RGPD3A6NKT7 AL392003.1-201ENST00000434394 243 ntBASIC0.22□□□□□ -2.37
RGPD3A6NKT7 RSL24D1P8-201ENST00000434442 492 ntBASIC0.22□□□□□ -2.37
RGPD3A6NKT7 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC0.22□□□□□ -2.37
RGPD3A6NKT7 RNA5SP269-201ENST00000459032 137 ntBASIC0.22□□□□□ -2.37
RGPD3A6NKT7 MIR3167-201ENST00000579623 85 ntBASIC0.22□□□□□ -2.37
RGPD3A6NKT7 AC093913.1-201ENST00000614178 329 ntBASIC0.22□□□□□ -2.37
RGPD3A6NKT7 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.22□□□□□ -2.37
RGPD3A6NKT7 RNU6-700P-201ENST00000391043 107 ntBASIC0.21□□□□□ -2.38
RGPD3A6NKT7 MTND2P24-201ENST00000453434 806 ntBASIC0.21□□□□□ -2.38
RGPD3A6NKT7 RNU6-197P-201ENST00000516680 100 ntBASIC0.21□□□□□ -2.38
RGPD3A6NKT7 RN7SKP88-201ENST00000516847 250 ntBASIC0.21□□□□□ -2.38
RGPD3A6NKT7 7SK.8-201ENST00000612110 250 ntBASIC0.21□□□□□ -2.38
RGPD3A6NKT7 7SK.11-201ENST00000615477 250 ntBASIC0.21□□□□□ -2.38
RGPD3A6NKT7 7SK.13-201ENST00000622040 250 ntBASIC0.21□□□□□ -2.38
RGPD3A6NKT7 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.2□□□□□ -2.38
RGPD3A6NKT7 MIR302D-201ENST00000362275 68 ntBASIC0.2□□□□□ -2.38
RGPD3A6NKT7 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC0.2□□□□□ -2.38
RGPD3A6NKT7 RNU6-152P-201ENST00000384037 107 ntBASIC0.2□□□□□ -2.38
RGPD3A6NKT7 AC118282.2-201ENST00000508739 374 ntBASIC0.2□□□□□ -2.38
RGPD3A6NKT7 AC074344.1-201ENST00000512823 224 ntBASIC0.2□□□□□ -2.38
RGPD3A6NKT7 AC117525.1-201ENST00000515228 503 ntBASIC0.2□□□□□ -2.38
RGPD3A6NKT7 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC0.2□□□□□ -2.38
RGPD3A6NKT7 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC0.2□□□□□ -2.38
RGPD3A6NKT7 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC0.2□□□□□ -2.38
RGPD3A6NKT7 MIR5093-201ENST00000583199 100 ntBASIC0.2□□□□□ -2.38
RGPD3A6NKT7 AC004067.1-201ENST00000608733 700 ntBASIC0.2□□□□□ -2.38
RGPD3A6NKT7 MIR6516-201ENST00000630554 81 ntBASIC0.2□□□□□ -2.38
RGPD3A6NKT7 AC017104.5-201ENST00000637647 639 ntBASIC0.2□□□□□ -2.38
RGPD3A6NKT7 RPL22P22-201ENST00000395439 379 ntBASIC0.19□□□□□ -2.38
RGPD3A6NKT7 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.19□□□□□ -2.38
RGPD3A6NKT7 RPS26P5-201ENST00000418544 335 ntBASIC0.19□□□□□ -2.38
RGPD3A6NKT7 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
RGPD3A6NKT7 UBE2V1P8-201ENST00000437166 265 ntBASIC0.19□□□□□ -2.38
RGPD3A6NKT7 BET1P1-201ENST00000482276 359 ntBASIC0.19□□□□□ -2.38
RGPD3A6NKT7 COX7A2P2-201ENST00000505291 250 ntBASIC0.19□□□□□ -2.38
RGPD3A6NKT7 MIR4305-201ENST00000583252 102 ntBASIC0.19□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms