Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Clcn2Q9R0A1 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.54■□□□□ 0.24
Clcn2Q9R0A1 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Clcn2Q9R0A1 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clcn2Q9R0A1 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clcn2Q9R0A1 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clcn2Q9R0A1 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clcn2Q9R0A1 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clcn2Q9R0A1 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Clcn2Q9R0A1 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clcn2Q9R0A1 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clcn2Q9R0A1 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.53■□□□□ 0.24
Clcn2Q9R0A1 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clcn2Q9R0A1 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clcn2Q9R0A1 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Clcn2Q9R0A1 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Clcn2Q9R0A1 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clcn2Q9R0A1 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Clcn2Q9R0A1 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.53■□□□□ 0.24
Clcn2Q9R0A1 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
Clcn2Q9R0A1 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clcn2Q9R0A1 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clcn2Q9R0A1 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clcn2Q9R0A1 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clcn2Q9R0A1 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clcn2Q9R0A1 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clcn2Q9R0A1 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Clcn2Q9R0A1 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clcn2Q9R0A1 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clcn2Q9R0A1 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Clcn2Q9R0A1 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.53■□□□□ 0.24
Clcn2Q9R0A1 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clcn2Q9R0A1 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Clcn2Q9R0A1 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clcn2Q9R0A1 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clcn2Q9R0A1 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.52■□□□□ 0.24
Clcn2Q9R0A1 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clcn2Q9R0A1 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clcn2Q9R0A1 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Clcn2Q9R0A1 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Clcn2Q9R0A1 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.52■□□□□ 0.24
Clcn2Q9R0A1 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.52■□□□□ 0.24
Clcn2Q9R0A1 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
Clcn2Q9R0A1 Gm18101-201ENSMUST00000215769 548 ntBASIC16.52■□□□□ 0.24
Clcn2Q9R0A1 Gm21559-201ENSMUST00000220638 855 ntBASIC16.52■□□□□ 0.24
Clcn2Q9R0A1 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Clcn2Q9R0A1 Gm8587-201ENSMUST00000076538 843 ntBASIC16.52■□□□□ 0.24
Clcn2Q9R0A1 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Clcn2Q9R0A1 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clcn2Q9R0A1 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Clcn2Q9R0A1 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Clcn2Q9R0A1 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Clcn2Q9R0A1 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Clcn2Q9R0A1 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.52■□□□□ 0.23
Clcn2Q9R0A1 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.52■□□□□ 0.23
Clcn2Q9R0A1 Gm37812-201ENSMUST00000195216 2475 ntBASIC16.52■□□□□ 0.23
Clcn2Q9R0A1 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Clcn2Q9R0A1 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Clcn2Q9R0A1 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clcn2Q9R0A1 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clcn2Q9R0A1 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clcn2Q9R0A1 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Clcn2Q9R0A1 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.51■□□□□ 0.23
Clcn2Q9R0A1 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clcn2Q9R0A1 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.51■□□□□ 0.23
Clcn2Q9R0A1 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clcn2Q9R0A1 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clcn2Q9R0A1 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Clcn2Q9R0A1 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Clcn2Q9R0A1 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clcn2Q9R0A1 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
Clcn2Q9R0A1 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clcn2Q9R0A1 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
Clcn2Q9R0A1 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clcn2Q9R0A1 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clcn2Q9R0A1 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clcn2Q9R0A1 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clcn2Q9R0A1 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
Clcn2Q9R0A1 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Clcn2Q9R0A1 Gm18958-201ENSMUST00000174258 762 ntBASIC16.5■□□□□ 0.23
Clcn2Q9R0A1 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.5■□□□□ 0.23
Clcn2Q9R0A1 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Clcn2Q9R0A1 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clcn2Q9R0A1 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clcn2Q9R0A1 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Clcn2Q9R0A1 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Clcn2Q9R0A1 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clcn2Q9R0A1 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clcn2Q9R0A1 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clcn2Q9R0A1 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Clcn2Q9R0A1 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Clcn2Q9R0A1 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Clcn2Q9R0A1 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Clcn2Q9R0A1 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Clcn2Q9R0A1 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Clcn2Q9R0A1 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Clcn2Q9R0A1 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Clcn2Q9R0A1 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.49■□□□□ 0.23
Clcn2Q9R0A1 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Clcn2Q9R0A1 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms