Protein–RNA interactions for Protein: Q9QXA5

Lsm4, U6 snRNA-associated Sm-like protein LSm4, mousemouse

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm4Q9QXA5 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm4Q9QXA5 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm4Q9QXA5 AC163637.1-201ENSMUST00000215491 1894 ntBASIC12.78□□□□□ -0.36
Lsm4Q9QXA5 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm4Q9QXA5 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm4Q9QXA5 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm4Q9QXA5 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm4Q9QXA5 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm4Q9QXA5 App-207ENSMUST00000227737 2827 ntBASIC12.78□□□□□ -0.36
Lsm4Q9QXA5 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm4Q9QXA5 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC12.78□□□□□ -0.36
Lsm4Q9QXA5 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC12.78□□□□□ -0.36
Lsm4Q9QXA5 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm4Q9QXA5 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC12.78□□□□□ -0.36
Lsm4Q9QXA5 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC12.78□□□□□ -0.36
Lsm4Q9QXA5 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC12.78□□□□□ -0.36
Lsm4Q9QXA5 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC12.78□□□□□ -0.36
Lsm4Q9QXA5 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Lsm4Q9QXA5 Gm36967-201ENSMUST00000193814 266 ntBASIC12.78□□□□□ -0.36
Lsm4Q9QXA5 Gm16042-201ENSMUST00000204813 1247 ntBASIC12.78□□□□□ -0.36
Lsm4Q9QXA5 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm4Q9QXA5 Timm23-208ENSMUST00000226683 750 ntBASIC12.78□□□□□ -0.36
Lsm4Q9QXA5 AC135637.1-201ENSMUST00000227750 365 ntBASIC12.78□□□□□ -0.36
Lsm4Q9QXA5 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm4Q9QXA5 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm4Q9QXA5 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm4Q9QXA5 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm4Q9QXA5 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Lsm4Q9QXA5 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Lsm4Q9QXA5 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm4Q9QXA5 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm4Q9QXA5 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm4Q9QXA5 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Lsm4Q9QXA5 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC12.78□□□□□ -0.36
Lsm4Q9QXA5 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm4Q9QXA5 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm4Q9QXA5 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Lsm4Q9QXA5 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC12.78□□□□□ -0.36
Lsm4Q9QXA5 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm4Q9QXA5 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm4Q9QXA5 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Lsm4Q9QXA5 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Lsm4Q9QXA5 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Lsm4Q9QXA5 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Lsm4Q9QXA5 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Lsm4Q9QXA5 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Lsm4Q9QXA5 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Lsm4Q9QXA5 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Lsm4Q9QXA5 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.36
Lsm4Q9QXA5 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Lsm4Q9QXA5 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Lsm4Q9QXA5 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Lsm4Q9QXA5 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lsm4Q9QXA5 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lsm4Q9QXA5 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC12.77□□□□□ -0.37
Lsm4Q9QXA5 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Lsm4Q9QXA5 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Lsm4Q9QXA5 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC12.77□□□□□ -0.37
Lsm4Q9QXA5 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC12.77□□□□□ -0.37
Lsm4Q9QXA5 Gm44450-201ENSMUST00000199528 114 ntBASIC12.77□□□□□ -0.37
Lsm4Q9QXA5 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lsm4Q9QXA5 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
Lsm4Q9QXA5 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lsm4Q9QXA5 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lsm4Q9QXA5 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lsm4Q9QXA5 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Lsm4Q9QXA5 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lsm4Q9QXA5 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Lsm4Q9QXA5 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC12.77□□□□□ -0.37
Lsm4Q9QXA5 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Lsm4Q9QXA5 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC12.77□□□□□ -0.37
Lsm4Q9QXA5 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Lsm4Q9QXA5 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Lsm4Q9QXA5 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lsm4Q9QXA5 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Lsm4Q9QXA5 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Lsm4Q9QXA5 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm4Q9QXA5 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm4Q9QXA5 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm4Q9QXA5 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm4Q9QXA5 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm4Q9QXA5 Gm27528-202ENSMUST00000222916 2012 ntBASIC12.76□□□□□ -0.37
Lsm4Q9QXA5 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm4Q9QXA5 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm4Q9QXA5 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm4Q9QXA5 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
Lsm4Q9QXA5 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC12.76□□□□□ -0.37
Lsm4Q9QXA5 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC12.76□□□□□ -0.37
Lsm4Q9QXA5 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC12.76□□□□□ -0.37
Lsm4Q9QXA5 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm4Q9QXA5 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm4Q9QXA5 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm4Q9QXA5 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm4Q9QXA5 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm4Q9QXA5 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm4Q9QXA5 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm4Q9QXA5 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm4Q9QXA5 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm4Q9QXA5 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm4Q9QXA5 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms