Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sec61a2Q9JLR1 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sec61a2Q9JLR1 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Sec61a2Q9JLR1 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Sec61a2Q9JLR1 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sec61a2Q9JLR1 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sec61a2Q9JLR1 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sec61a2Q9JLR1 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Sec61a2Q9JLR1 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Sec61a2Q9JLR1 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC14.58□□□□□ -0.08
Sec61a2Q9JLR1 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC14.58□□□□□ -0.08
Sec61a2Q9JLR1 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sec61a2Q9JLR1 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Sec61a2Q9JLR1 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sec61a2Q9JLR1 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC14.58□□□□□ -0.08
Sec61a2Q9JLR1 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Sec61a2Q9JLR1 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sec61a2Q9JLR1 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sec61a2Q9JLR1 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Sec61a2Q9JLR1 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Sec61a2Q9JLR1 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sec61a2Q9JLR1 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC14.58□□□□□ -0.08
Sec61a2Q9JLR1 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC14.58□□□□□ -0.08
Sec61a2Q9JLR1 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sec61a2Q9JLR1 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sec61a2Q9JLR1 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Sec61a2Q9JLR1 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sec61a2Q9JLR1 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sec61a2Q9JLR1 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Sec61a2Q9JLR1 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sec61a2Q9JLR1 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sec61a2Q9JLR1 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sec61a2Q9JLR1 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sec61a2Q9JLR1 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Sec61a2Q9JLR1 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sec61a2Q9JLR1 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Sec61a2Q9JLR1 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Sec61a2Q9JLR1 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sec61a2Q9JLR1 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sec61a2Q9JLR1 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Sec61a2Q9JLR1 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Sec61a2Q9JLR1 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Sec61a2Q9JLR1 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Sec61a2Q9JLR1 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sec61a2Q9JLR1 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Sec61a2Q9JLR1 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC14.57□□□□□ -0.08
Sec61a2Q9JLR1 Mir1668-201ENSMUST00000184114 107 ntBASIC14.57□□□□□ -0.08
Sec61a2Q9JLR1 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC14.57□□□□□ -0.08
Sec61a2Q9JLR1 Gm18115-201ENSMUST00000221209 621 ntBASIC14.57□□□□□ -0.08
Sec61a2Q9JLR1 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Sec61a2Q9JLR1 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sec61a2Q9JLR1 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Sec61a2Q9JLR1 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC14.57□□□□□ -0.08
Sec61a2Q9JLR1 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sec61a2Q9JLR1 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC14.57□□□□□ -0.08
Sec61a2Q9JLR1 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sec61a2Q9JLR1 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sec61a2Q9JLR1 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sec61a2Q9JLR1 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sec61a2Q9JLR1 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sec61a2Q9JLR1 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sec61a2Q9JLR1 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sec61a2Q9JLR1 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sec61a2Q9JLR1 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sec61a2Q9JLR1 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sec61a2Q9JLR1 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Sec61a2Q9JLR1 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sec61a2Q9JLR1 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sec61a2Q9JLR1 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sec61a2Q9JLR1 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sec61a2Q9JLR1 Gm23634-201ENSMUST00000175071 91 ntBASIC14.56□□□□□ -0.08
Sec61a2Q9JLR1 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC14.56□□□□□ -0.08
Sec61a2Q9JLR1 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC14.56□□□□□ -0.08
Sec61a2Q9JLR1 Gm21559-201ENSMUST00000220638 855 ntBASIC14.56□□□□□ -0.08
Sec61a2Q9JLR1 Gm8587-201ENSMUST00000076538 843 ntBASIC14.56□□□□□ -0.08
Sec61a2Q9JLR1 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sec61a2Q9JLR1 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sec61a2Q9JLR1 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sec61a2Q9JLR1 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC14.56□□□□□ -0.08
Sec61a2Q9JLR1 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Sec61a2Q9JLR1 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sec61a2Q9JLR1 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sec61a2Q9JLR1 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Sec61a2Q9JLR1 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sec61a2Q9JLR1 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sec61a2Q9JLR1 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sec61a2Q9JLR1 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sec61a2Q9JLR1 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sec61a2Q9JLR1 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC14.56□□□□□ -0.08
Sec61a2Q9JLR1 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sec61a2Q9JLR1 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sec61a2Q9JLR1 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC14.55□□□□□ -0.08
Sec61a2Q9JLR1 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sec61a2Q9JLR1 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sec61a2Q9JLR1 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sec61a2Q9JLR1 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sec61a2Q9JLR1 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
Sec61a2Q9JLR1 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC14.55□□□□□ -0.08
Sec61a2Q9JLR1 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC14.55□□□□□ -0.08
Sec61a2Q9JLR1 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms