Protein–RNA interactions for Protein: Q9JKE1

Trem3, TREM-3, mousemouse

Predictions only

Length 183 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem3Q9JKE1 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trem3Q9JKE1 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trem3Q9JKE1 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trem3Q9JKE1 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trem3Q9JKE1 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trem3Q9JKE1 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Trem3Q9JKE1 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trem3Q9JKE1 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trem3Q9JKE1 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trem3Q9JKE1 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trem3Q9JKE1 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trem3Q9JKE1 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trem3Q9JKE1 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trem3Q9JKE1 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trem3Q9JKE1 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trem3Q9JKE1 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC13.08□□□□□ -0.32
Trem3Q9JKE1 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trem3Q9JKE1 Gm10653-202ENSMUST00000139570 835 ntBASIC13.08□□□□□ -0.32
Trem3Q9JKE1 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trem3Q9JKE1 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Trem3Q9JKE1 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
Trem3Q9JKE1 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC13.08□□□□□ -0.32
Trem3Q9JKE1 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trem3Q9JKE1 Gm3375-201ENSMUST00000203929 796 ntBASIC13.08□□□□□ -0.32
Trem3Q9JKE1 Gm18115-201ENSMUST00000221209 621 ntBASIC13.08□□□□□ -0.32
Trem3Q9JKE1 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trem3Q9JKE1 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trem3Q9JKE1 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Trem3Q9JKE1 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trem3Q9JKE1 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trem3Q9JKE1 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trem3Q9JKE1 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trem3Q9JKE1 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
Trem3Q9JKE1 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trem3Q9JKE1 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trem3Q9JKE1 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC13.08□□□□□ -0.32
Trem3Q9JKE1 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trem3Q9JKE1 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trem3Q9JKE1 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trem3Q9JKE1 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trem3Q9JKE1 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trem3Q9JKE1 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trem3Q9JKE1 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trem3Q9JKE1 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trem3Q9JKE1 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trem3Q9JKE1 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trem3Q9JKE1 Zfp264-201ENSMUST00000208656 1563 ntBASIC13.07□□□□□ -0.32
Trem3Q9JKE1 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trem3Q9JKE1 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
Trem3Q9JKE1 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Trem3Q9JKE1 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trem3Q9JKE1 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trem3Q9JKE1 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trem3Q9JKE1 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trem3Q9JKE1 Gm13168-201ENSMUST00000121771 632 ntBASIC13.07□□□□□ -0.32
Trem3Q9JKE1 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC13.07□□□□□ -0.32
Trem3Q9JKE1 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC13.07□□□□□ -0.32
Trem3Q9JKE1 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC13.07□□□□□ -0.32
Trem3Q9JKE1 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trem3Q9JKE1 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trem3Q9JKE1 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC13.07□□□□□ -0.32
Trem3Q9JKE1 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trem3Q9JKE1 Gm42473-201ENSMUST00000201056 2291 ntBASIC13.07□□□□□ -0.32
Trem3Q9JKE1 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trem3Q9JKE1 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trem3Q9JKE1 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trem3Q9JKE1 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trem3Q9JKE1 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trem3Q9JKE1 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trem3Q9JKE1 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC13.07□□□□□ -0.32
Trem3Q9JKE1 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trem3Q9JKE1 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trem3Q9JKE1 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trem3Q9JKE1 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trem3Q9JKE1 Slc35b2-202ENSMUST00000223987 1766 ntBASIC13.07□□□□□ -0.32
Trem3Q9JKE1 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trem3Q9JKE1 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trem3Q9JKE1 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trem3Q9JKE1 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trem3Q9JKE1 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC13.07□□□□□ -0.32
Trem3Q9JKE1 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trem3Q9JKE1 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Trem3Q9JKE1 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trem3Q9JKE1 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC13.06□□□□□ -0.32
Trem3Q9JKE1 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trem3Q9JKE1 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trem3Q9JKE1 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trem3Q9JKE1 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC13.06□□□□□ -0.32
Trem3Q9JKE1 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC13.06□□□□□ -0.32
Trem3Q9JKE1 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Trem3Q9JKE1 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trem3Q9JKE1 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trem3Q9JKE1 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trem3Q9JKE1 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trem3Q9JKE1 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
Trem3Q9JKE1 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC13.06□□□□□ -0.32
Trem3Q9JKE1 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trem3Q9JKE1 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC13.06□□□□□ -0.32
Trem3Q9JKE1 Gm44616-201ENSMUST00000206417 1732 ntBASIC13.06□□□□□ -0.32
Trem3Q9JKE1 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms