Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
Scn5aQ9JJV9 Gm4899-201ENSMUST00000178708 719 ntBASIC16.62■□□□□ 0.25
Scn5aQ9JJV9 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC16.62■□□□□ 0.25
Scn5aQ9JJV9 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC16.62■□□□□ 0.25
Scn5aQ9JJV9 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn5aQ9JJV9 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn5aQ9JJV9 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Scn5aQ9JJV9 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn5aQ9JJV9 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.62■□□□□ 0.25
Scn5aQ9JJV9 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn5aQ9JJV9 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Scn5aQ9JJV9 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn5aQ9JJV9 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn5aQ9JJV9 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn5aQ9JJV9 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn5aQ9JJV9 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn5aQ9JJV9 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn5aQ9JJV9 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn5aQ9JJV9 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn5aQ9JJV9 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC16.62■□□□□ 0.25
Scn5aQ9JJV9 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
Scn5aQ9JJV9 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn5aQ9JJV9 Gm9682-201ENSMUST00000197505 556 ntBASIC16.62■□□□□ 0.25
Scn5aQ9JJV9 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn5aQ9JJV9 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
Scn5aQ9JJV9 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn5aQ9JJV9 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn5aQ9JJV9 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn5aQ9JJV9 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC16.61■□□□□ 0.25
Scn5aQ9JJV9 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.61■□□□□ 0.25
Scn5aQ9JJV9 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn5aQ9JJV9 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn5aQ9JJV9 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Scn5aQ9JJV9 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn5aQ9JJV9 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Scn5aQ9JJV9 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Scn5aQ9JJV9 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn5aQ9JJV9 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn5aQ9JJV9 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC16.61■□□□□ 0.25
Scn5aQ9JJV9 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn5aQ9JJV9 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn5aQ9JJV9 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Scn5aQ9JJV9 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn5aQ9JJV9 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn5aQ9JJV9 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.61■□□□□ 0.25
Scn5aQ9JJV9 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.61■□□□□ 0.25
Scn5aQ9JJV9 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Scn5aQ9JJV9 Best4-ps-201ENSMUST00000129783 1380 ntBASIC16.6■□□□□ 0.25
Scn5aQ9JJV9 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Scn5aQ9JJV9 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Scn5aQ9JJV9 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Scn5aQ9JJV9 Gm5253-201ENSMUST00000187104 1025 ntBASIC16.6■□□□□ 0.25
Scn5aQ9JJV9 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC16.6■□□□□ 0.25
Scn5aQ9JJV9 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.6■□□□□ 0.25
Scn5aQ9JJV9 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Scn5aQ9JJV9 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scn5aQ9JJV9 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scn5aQ9JJV9 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scn5aQ9JJV9 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scn5aQ9JJV9 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.6■□□□□ 0.25
Scn5aQ9JJV9 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scn5aQ9JJV9 Gm11185-201ENSMUST00000117732 1007 ntBASIC16.6■□□□□ 0.25
Scn5aQ9JJV9 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Scn5aQ9JJV9 Gm44492-201ENSMUST00000197012 141 ntBASIC16.6■□□□□ 0.25
Scn5aQ9JJV9 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scn5aQ9JJV9 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Scn5aQ9JJV9 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
Scn5aQ9JJV9 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Scn5aQ9JJV9 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scn5aQ9JJV9 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scn5aQ9JJV9 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scn5aQ9JJV9 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
Scn5aQ9JJV9 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC16.59■□□□□ 0.25
Scn5aQ9JJV9 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Scn5aQ9JJV9 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scn5aQ9JJV9 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scn5aQ9JJV9 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Scn5aQ9JJV9 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scn5aQ9JJV9 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Scn5aQ9JJV9 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scn5aQ9JJV9 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scn5aQ9JJV9 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Scn5aQ9JJV9 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scn5aQ9JJV9 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Scn5aQ9JJV9 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Scn5aQ9JJV9 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC16.58■□□□□ 0.25
Scn5aQ9JJV9 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Scn5aQ9JJV9 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Scn5aQ9JJV9 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Scn5aQ9JJV9 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Scn5aQ9JJV9 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Scn5aQ9JJV9 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Scn5aQ9JJV9 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Scn5aQ9JJV9 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Scn5aQ9JJV9 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Scn5aQ9JJV9 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Scn5aQ9JJV9 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Scn5aQ9JJV9 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Scn5aQ9JJV9 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC16.58■□□□□ 0.24
Scn5aQ9JJV9 AC159114.1-201ENSMUST00000220349 266 ntBASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms