Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Cacna1fQ9JIS7 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC18.27■□□□□ 0.52
Cacna1fQ9JIS7 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cacna1fQ9JIS7 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cacna1fQ9JIS7 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cacna1fQ9JIS7 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cacna1fQ9JIS7 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC18.27■□□□□ 0.52
Cacna1fQ9JIS7 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cacna1fQ9JIS7 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.27■□□□□ 0.52
Cacna1fQ9JIS7 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cacna1fQ9JIS7 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC18.27■□□□□ 0.51
Cacna1fQ9JIS7 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cacna1fQ9JIS7 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cacna1fQ9JIS7 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Cacna1fQ9JIS7 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cacna1fQ9JIS7 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
Cacna1fQ9JIS7 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cacna1fQ9JIS7 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC18.26■□□□□ 0.51
Cacna1fQ9JIS7 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cacna1fQ9JIS7 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cacna1fQ9JIS7 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.26■□□□□ 0.51
Cacna1fQ9JIS7 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC18.26■□□□□ 0.51
Cacna1fQ9JIS7 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC18.26■□□□□ 0.51
Cacna1fQ9JIS7 Gm18489-201ENSMUST00000172565 551 ntBASIC18.26■□□□□ 0.51
Cacna1fQ9JIS7 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC18.26■□□□□ 0.51
Cacna1fQ9JIS7 Gm45612-201ENSMUST00000211320 160 ntBASIC18.26■□□□□ 0.51
Cacna1fQ9JIS7 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cacna1fQ9JIS7 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cacna1fQ9JIS7 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cacna1fQ9JIS7 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC18.25■□□□□ 0.51
Cacna1fQ9JIS7 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cacna1fQ9JIS7 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cacna1fQ9JIS7 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Cacna1fQ9JIS7 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Cacna1fQ9JIS7 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cacna1fQ9JIS7 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cacna1fQ9JIS7 Gm12892-201ENSMUST00000117367 1146 ntBASIC18.25■□□□□ 0.51
Cacna1fQ9JIS7 Gm44492-201ENSMUST00000197012 141 ntBASIC18.25■□□□□ 0.51
Cacna1fQ9JIS7 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC18.25■□□□□ 0.51
Cacna1fQ9JIS7 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC18.25■□□□□ 0.51
Cacna1fQ9JIS7 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cacna1fQ9JIS7 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cacna1fQ9JIS7 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cacna1fQ9JIS7 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cacna1fQ9JIS7 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cacna1fQ9JIS7 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cacna1fQ9JIS7 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cacna1fQ9JIS7 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cacna1fQ9JIS7 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
Cacna1fQ9JIS7 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cacna1fQ9JIS7 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cacna1fQ9JIS7 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Cacna1fQ9JIS7 Gm14701-201ENSMUST00000117156 348 ntBASIC18.24■□□□□ 0.51
Cacna1fQ9JIS7 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC18.24■□□□□ 0.51
Cacna1fQ9JIS7 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cacna1fQ9JIS7 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Cacna1fQ9JIS7 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cacna1fQ9JIS7 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cacna1fQ9JIS7 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Cacna1fQ9JIS7 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Cacna1fQ9JIS7 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cacna1fQ9JIS7 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Cacna1fQ9JIS7 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cacna1fQ9JIS7 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cacna1fQ9JIS7 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cacna1fQ9JIS7 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cacna1fQ9JIS7 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cacna1fQ9JIS7 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC18.24■□□□□ 0.51
Cacna1fQ9JIS7 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC18.24■□□□□ 0.51
Cacna1fQ9JIS7 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Cacna1fQ9JIS7 Gm27301-201ENSMUST00000184012 127 ntBASIC18.24■□□□□ 0.51
Cacna1fQ9JIS7 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cacna1fQ9JIS7 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Cacna1fQ9JIS7 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cacna1fQ9JIS7 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Cacna1fQ9JIS7 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cacna1fQ9JIS7 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cacna1fQ9JIS7 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Cacna1fQ9JIS7 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cacna1fQ9JIS7 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC18.23■□□□□ 0.51
Cacna1fQ9JIS7 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cacna1fQ9JIS7 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cacna1fQ9JIS7 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cacna1fQ9JIS7 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cacna1fQ9JIS7 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
Cacna1fQ9JIS7 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC18.23■□□□□ 0.51
Cacna1fQ9JIS7 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
Cacna1fQ9JIS7 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cacna1fQ9JIS7 Gm44335-201ENSMUST00000196879 141 ntBASIC18.23■□□□□ 0.51
Cacna1fQ9JIS7 Gm44297-201ENSMUST00000198304 141 ntBASIC18.23■□□□□ 0.51
Cacna1fQ9JIS7 Gm44346-201ENSMUST00000198851 141 ntBASIC18.23■□□□□ 0.51
Cacna1fQ9JIS7 Gm45747-201ENSMUST00000212203 999 ntBASIC18.23■□□□□ 0.51
Cacna1fQ9JIS7 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cacna1fQ9JIS7 Rbfox2-206ENSMUST00000227314 1810 ntBASIC18.23■□□□□ 0.51
Cacna1fQ9JIS7 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cacna1fQ9JIS7 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cacna1fQ9JIS7 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cacna1fQ9JIS7 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cacna1fQ9JIS7 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cacna1fQ9JIS7 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms