Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vps35Q9EQH3 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Vps35Q9EQH3 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Vps35Q9EQH3 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Vps35Q9EQH3 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.2■□□□□ 0.18
Vps35Q9EQH3 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC16.2■□□□□ 0.18
Vps35Q9EQH3 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
Vps35Q9EQH3 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.2■□□□□ 0.18
Vps35Q9EQH3 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Vps35Q9EQH3 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
Vps35Q9EQH3 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Vps35Q9EQH3 AC130713.1-201ENSMUST00000228853 1096 ntBASIC16.2■□□□□ 0.18
Vps35Q9EQH3 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vps35Q9EQH3 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vps35Q9EQH3 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.2■□□□□ 0.18
Vps35Q9EQH3 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vps35Q9EQH3 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Vps35Q9EQH3 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Vps35Q9EQH3 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps35Q9EQH3 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.19■□□□□ 0.18
Vps35Q9EQH3 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps35Q9EQH3 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps35Q9EQH3 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Vps35Q9EQH3 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps35Q9EQH3 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps35Q9EQH3 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Vps35Q9EQH3 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Vps35Q9EQH3 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps35Q9EQH3 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Vps35Q9EQH3 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.19■□□□□ 0.18
Vps35Q9EQH3 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.19■□□□□ 0.18
Vps35Q9EQH3 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps35Q9EQH3 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps35Q9EQH3 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Vps35Q9EQH3 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Vps35Q9EQH3 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps35Q9EQH3 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps35Q9EQH3 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps35Q9EQH3 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps35Q9EQH3 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps35Q9EQH3 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps35Q9EQH3 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps35Q9EQH3 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps35Q9EQH3 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps35Q9EQH3 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps35Q9EQH3 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps35Q9EQH3 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Vps35Q9EQH3 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Vps35Q9EQH3 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps35Q9EQH3 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps35Q9EQH3 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps35Q9EQH3 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Vps35Q9EQH3 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Vps35Q9EQH3 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps35Q9EQH3 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps35Q9EQH3 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps35Q9EQH3 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps35Q9EQH3 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Vps35Q9EQH3 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Vps35Q9EQH3 Gm27704-201ENSMUST00000185094 107 ntBASIC16.18■□□□□ 0.18
Vps35Q9EQH3 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps35Q9EQH3 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Vps35Q9EQH3 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps35Q9EQH3 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps35Q9EQH3 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps35Q9EQH3 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.18■□□□□ 0.18
Vps35Q9EQH3 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Vps35Q9EQH3 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Vps35Q9EQH3 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Vps35Q9EQH3 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.17■□□□□ 0.18
Vps35Q9EQH3 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.17■□□□□ 0.18
Vps35Q9EQH3 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vps35Q9EQH3 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vps35Q9EQH3 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vps35Q9EQH3 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC16.17■□□□□ 0.18
Vps35Q9EQH3 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Vps35Q9EQH3 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vps35Q9EQH3 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vps35Q9EQH3 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vps35Q9EQH3 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Vps35Q9EQH3 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vps35Q9EQH3 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vps35Q9EQH3 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vps35Q9EQH3 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Vps35Q9EQH3 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
Vps35Q9EQH3 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.17■□□□□ 0.18
Vps35Q9EQH3 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Vps35Q9EQH3 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps35Q9EQH3 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps35Q9EQH3 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps35Q9EQH3 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps35Q9EQH3 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps35Q9EQH3 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.16■□□□□ 0.18
Vps35Q9EQH3 Dancr-204ENSMUST00000132389 2347 ntBASIC16.16■□□□□ 0.18
Vps35Q9EQH3 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps35Q9EQH3 Gm7284-201ENSMUST00000131667 944 ntBASIC16.16■□□□□ 0.18
Vps35Q9EQH3 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Vps35Q9EQH3 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps35Q9EQH3 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Vps35Q9EQH3 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms