Protein–RNA interactions for Protein: Q9DCR2

Ap3s1, AP-3 complex subunit sigma-1, mousemouse

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ap3s1Q9DCR2 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC14.46□□□□□ -0.09
Ap3s1Q9DCR2 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC14.46□□□□□ -0.09
Ap3s1Q9DCR2 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ap3s1Q9DCR2 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ap3s1Q9DCR2 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ap3s1Q9DCR2 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ap3s1Q9DCR2 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
Ap3s1Q9DCR2 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ap3s1Q9DCR2 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.46□□□□□ -0.1
Ap3s1Q9DCR2 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ap3s1Q9DCR2 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Ap3s1Q9DCR2 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
Ap3s1Q9DCR2 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ap3s1Q9DCR2 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ap3s1Q9DCR2 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ap3s1Q9DCR2 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ap3s1Q9DCR2 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ap3s1Q9DCR2 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ap3s1Q9DCR2 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
Ap3s1Q9DCR2 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ap3s1Q9DCR2 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ap3s1Q9DCR2 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ap3s1Q9DCR2 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Ap3s1Q9DCR2 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Ap3s1Q9DCR2 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ap3s1Q9DCR2 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ap3s1Q9DCR2 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ap3s1Q9DCR2 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ap3s1Q9DCR2 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC14.45□□□□□ -0.1
Ap3s1Q9DCR2 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ap3s1Q9DCR2 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ap3s1Q9DCR2 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ap3s1Q9DCR2 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ap3s1Q9DCR2 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ap3s1Q9DCR2 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ap3s1Q9DCR2 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ap3s1Q9DCR2 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ap3s1Q9DCR2 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Ap3s1Q9DCR2 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ap3s1Q9DCR2 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Ap3s1Q9DCR2 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Ap3s1Q9DCR2 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ap3s1Q9DCR2 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ap3s1Q9DCR2 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ap3s1Q9DCR2 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ap3s1Q9DCR2 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ap3s1Q9DCR2 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ap3s1Q9DCR2 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.45□□□□□ -0.1
Ap3s1Q9DCR2 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ap3s1Q9DCR2 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ap3s1Q9DCR2 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ap3s1Q9DCR2 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Ap3s1Q9DCR2 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ap3s1Q9DCR2 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ap3s1Q9DCR2 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ap3s1Q9DCR2 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.44□□□□□ -0.1
Ap3s1Q9DCR2 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Ap3s1Q9DCR2 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ap3s1Q9DCR2 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ap3s1Q9DCR2 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC14.44□□□□□ -0.1
Ap3s1Q9DCR2 AC099934.2-201ENSMUST00000196389 70 ntBASIC14.44□□□□□ -0.1
Ap3s1Q9DCR2 AC156953.1-201ENSMUST00000196953 70 ntBASIC14.44□□□□□ -0.1
Ap3s1Q9DCR2 AC157822.2-201ENSMUST00000200291 70 ntBASIC14.44□□□□□ -0.1
Ap3s1Q9DCR2 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ap3s1Q9DCR2 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ap3s1Q9DCR2 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ap3s1Q9DCR2 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ap3s1Q9DCR2 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ap3s1Q9DCR2 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ap3s1Q9DCR2 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ap3s1Q9DCR2 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ap3s1Q9DCR2 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
Ap3s1Q9DCR2 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ap3s1Q9DCR2 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ap3s1Q9DCR2 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ap3s1Q9DCR2 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ap3s1Q9DCR2 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Ap3s1Q9DCR2 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ap3s1Q9DCR2 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ap3s1Q9DCR2 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ap3s1Q9DCR2 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.43□□□□□ -0.1
Ap3s1Q9DCR2 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ap3s1Q9DCR2 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Ap3s1Q9DCR2 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ap3s1Q9DCR2 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.43□□□□□ -0.1
Ap3s1Q9DCR2 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ap3s1Q9DCR2 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ap3s1Q9DCR2 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ap3s1Q9DCR2 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC14.43□□□□□ -0.1
Ap3s1Q9DCR2 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ap3s1Q9DCR2 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ap3s1Q9DCR2 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ap3s1Q9DCR2 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ap3s1Q9DCR2 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Ap3s1Q9DCR2 App-207ENSMUST00000227737 2827 ntBASIC14.43□□□□□ -0.1
Ap3s1Q9DCR2 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ap3s1Q9DCR2 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Ap3s1Q9DCR2 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ap3s1Q9DCR2 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Ap3s1Q9DCR2 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms