Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Cpne8Q9DC53 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cpne8Q9DC53 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.88■□□□□ 0.29
Cpne8Q9DC53 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
Cpne8Q9DC53 Gm18101-201ENSMUST00000215769 548 ntBASIC16.88■□□□□ 0.29
Cpne8Q9DC53 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cpne8Q9DC53 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cpne8Q9DC53 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cpne8Q9DC53 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cpne8Q9DC53 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cpne8Q9DC53 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.88■□□□□ 0.29
Cpne8Q9DC53 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cpne8Q9DC53 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cpne8Q9DC53 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cpne8Q9DC53 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Cpne8Q9DC53 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cpne8Q9DC53 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cpne8Q9DC53 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cpne8Q9DC53 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cpne8Q9DC53 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cpne8Q9DC53 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cpne8Q9DC53 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Cpne8Q9DC53 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.87■□□□□ 0.29
Cpne8Q9DC53 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.87■□□□□ 0.29
Cpne8Q9DC53 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cpne8Q9DC53 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cpne8Q9DC53 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cpne8Q9DC53 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Cpne8Q9DC53 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cpne8Q9DC53 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
Cpne8Q9DC53 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cpne8Q9DC53 Mir770-201ENSMUST00000103252 94 ntBASIC16.87■□□□□ 0.29
Cpne8Q9DC53 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cpne8Q9DC53 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cpne8Q9DC53 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Cpne8Q9DC53 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cpne8Q9DC53 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cpne8Q9DC53 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cpne8Q9DC53 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.87■□□□□ 0.29
Cpne8Q9DC53 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cpne8Q9DC53 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cpne8Q9DC53 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cpne8Q9DC53 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cpne8Q9DC53 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cpne8Q9DC53 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cpne8Q9DC53 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cpne8Q9DC53 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cpne8Q9DC53 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cpne8Q9DC53 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cpne8Q9DC53 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cpne8Q9DC53 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Cpne8Q9DC53 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cpne8Q9DC53 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cpne8Q9DC53 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cpne8Q9DC53 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Cpne8Q9DC53 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cpne8Q9DC53 Gm11355-201ENSMUST00000121120 306 ntBASIC16.86■□□□□ 0.29
Cpne8Q9DC53 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.86■□□□□ 0.29
Cpne8Q9DC53 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Cpne8Q9DC53 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Cpne8Q9DC53 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.86■□□□□ 0.29
Cpne8Q9DC53 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC16.86■□□□□ 0.29
Cpne8Q9DC53 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.86■□□□□ 0.29
Cpne8Q9DC53 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC16.86■□□□□ 0.29
Cpne8Q9DC53 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cpne8Q9DC53 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cpne8Q9DC53 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cpne8Q9DC53 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
Cpne8Q9DC53 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cpne8Q9DC53 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Cpne8Q9DC53 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Cpne8Q9DC53 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cpne8Q9DC53 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cpne8Q9DC53 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cpne8Q9DC53 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cpne8Q9DC53 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Cpne8Q9DC53 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cpne8Q9DC53 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cpne8Q9DC53 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cpne8Q9DC53 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cpne8Q9DC53 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cpne8Q9DC53 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC16.85■□□□□ 0.29
Cpne8Q9DC53 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cpne8Q9DC53 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cpne8Q9DC53 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cpne8Q9DC53 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Cpne8Q9DC53 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Cpne8Q9DC53 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cpne8Q9DC53 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
Cpne8Q9DC53 Gm6345-202ENSMUST00000180900 204 ntBASIC16.85■□□□□ 0.29
Cpne8Q9DC53 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cpne8Q9DC53 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cpne8Q9DC53 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cpne8Q9DC53 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.85■□□□□ 0.29
Cpne8Q9DC53 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cpne8Q9DC53 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cpne8Q9DC53 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cpne8Q9DC53 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cpne8Q9DC53 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cpne8Q9DC53 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms