Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lysmd1Q9D0E3 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lysmd1Q9D0E3 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Lysmd1Q9D0E3 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lysmd1Q9D0E3 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC17.23■□□□□ 0.35
Lysmd1Q9D0E3 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC17.23■□□□□ 0.35
Lysmd1Q9D0E3 Gm18827-201ENSMUST00000188341 790 ntBASIC17.23■□□□□ 0.35
Lysmd1Q9D0E3 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Lysmd1Q9D0E3 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Lysmd1Q9D0E3 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lysmd1Q9D0E3 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lysmd1Q9D0E3 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Lysmd1Q9D0E3 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lysmd1Q9D0E3 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lysmd1Q9D0E3 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Lysmd1Q9D0E3 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.23■□□□□ 0.35
Lysmd1Q9D0E3 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lysmd1Q9D0E3 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lysmd1Q9D0E3 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lysmd1Q9D0E3 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Lysmd1Q9D0E3 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lysmd1Q9D0E3 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Lysmd1Q9D0E3 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lysmd1Q9D0E3 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lysmd1Q9D0E3 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lysmd1Q9D0E3 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC17.22■□□□□ 0.35
Lysmd1Q9D0E3 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Lysmd1Q9D0E3 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Lysmd1Q9D0E3 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Lysmd1Q9D0E3 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Lysmd1Q9D0E3 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lysmd1Q9D0E3 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lysmd1Q9D0E3 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lysmd1Q9D0E3 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lysmd1Q9D0E3 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lysmd1Q9D0E3 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.21■□□□□ 0.35
Lysmd1Q9D0E3 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lysmd1Q9D0E3 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lysmd1Q9D0E3 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lysmd1Q9D0E3 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Lysmd1Q9D0E3 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Lysmd1Q9D0E3 Gm27838-201ENSMUST00000184829 128 ntBASIC17.21■□□□□ 0.35
Lysmd1Q9D0E3 Gm6218-201ENSMUST00000219812 628 ntBASIC17.21■□□□□ 0.35
Lysmd1Q9D0E3 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lysmd1Q9D0E3 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lysmd1Q9D0E3 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lysmd1Q9D0E3 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lysmd1Q9D0E3 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
Lysmd1Q9D0E3 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Lysmd1Q9D0E3 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lysmd1Q9D0E3 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lysmd1Q9D0E3 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lysmd1Q9D0E3 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Lysmd1Q9D0E3 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lysmd1Q9D0E3 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Lysmd1Q9D0E3 Gm9908-201ENSMUST00000211534 448 ntBASIC17.2■□□□□ 0.34
Lysmd1Q9D0E3 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lysmd1Q9D0E3 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC17.2■□□□□ 0.34
Lysmd1Q9D0E3 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Lysmd1Q9D0E3 Fst-202ENSMUST00000223640 2612 ntBASIC17.2■□□□□ 0.34
Lysmd1Q9D0E3 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Lysmd1Q9D0E3 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lysmd1Q9D0E3 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Lysmd1Q9D0E3 Slc35b2-202ENSMUST00000223987 1766 ntBASIC17.2■□□□□ 0.34
Lysmd1Q9D0E3 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lysmd1Q9D0E3 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lysmd1Q9D0E3 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lysmd1Q9D0E3 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Lysmd1Q9D0E3 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Lysmd1Q9D0E3 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lysmd1Q9D0E3 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lysmd1Q9D0E3 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Lysmd1Q9D0E3 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Lysmd1Q9D0E3 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC17.19■□□□□ 0.34
Lysmd1Q9D0E3 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Lysmd1Q9D0E3 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC17.19■□□□□ 0.34
Lysmd1Q9D0E3 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC17.19■□□□□ 0.34
Lysmd1Q9D0E3 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC17.19■□□□□ 0.34
Lysmd1Q9D0E3 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC17.19■□□□□ 0.34
Lysmd1Q9D0E3 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lysmd1Q9D0E3 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Lysmd1Q9D0E3 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lysmd1Q9D0E3 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lysmd1Q9D0E3 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lysmd1Q9D0E3 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Lysmd1Q9D0E3 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC17.19■□□□□ 0.34
Lysmd1Q9D0E3 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lysmd1Q9D0E3 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Lysmd1Q9D0E3 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lysmd1Q9D0E3 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lysmd1Q9D0E3 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Lysmd1Q9D0E3 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lysmd1Q9D0E3 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lysmd1Q9D0E3 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lysmd1Q9D0E3 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lysmd1Q9D0E3 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Lysmd1Q9D0E3 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC17.18■□□□□ 0.34
Lysmd1Q9D0E3 Gm12091-201ENSMUST00000146791 830 ntBASIC17.18■□□□□ 0.34
Lysmd1Q9D0E3 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Lysmd1Q9D0E3 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms