Protein–RNA interactions for Protein: Q9CYR0

Ssbp1, Single-stranded DNA-binding protein, mitochondrial, mousemouse

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp1Q9CYR0 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Ssbp1Q9CYR0 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Ssbp1Q9CYR0 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ssbp1Q9CYR0 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Ssbp1Q9CYR0 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC11.88□□□□□ -0.51
Ssbp1Q9CYR0 Gm38205-201ENSMUST00000192243 258 ntBASIC11.88□□□□□ -0.51
Ssbp1Q9CYR0 Gm5812-201ENSMUST00000061073 957 ntBASIC11.88□□□□□ -0.51
Ssbp1Q9CYR0 Gm9959-201ENSMUST00000068277 390 ntBASIC11.88□□□□□ -0.51
Ssbp1Q9CYR0 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ssbp1Q9CYR0 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ssbp1Q9CYR0 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ssbp1Q9CYR0 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ssbp1Q9CYR0 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ssbp1Q9CYR0 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Ssbp1Q9CYR0 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ssbp1Q9CYR0 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ssbp1Q9CYR0 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Ssbp1Q9CYR0 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ssbp1Q9CYR0 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Ssbp1Q9CYR0 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ssbp1Q9CYR0 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Ssbp1Q9CYR0 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ssbp1Q9CYR0 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ssbp1Q9CYR0 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ssbp1Q9CYR0 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ssbp1Q9CYR0 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ssbp1Q9CYR0 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ssbp1Q9CYR0 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ssbp1Q9CYR0 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Ssbp1Q9CYR0 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ssbp1Q9CYR0 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ssbp1Q9CYR0 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC11.87□□□□□ -0.51
Ssbp1Q9CYR0 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ssbp1Q9CYR0 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC11.87□□□□□ -0.51
Ssbp1Q9CYR0 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC11.87□□□□□ -0.51
Ssbp1Q9CYR0 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ssbp1Q9CYR0 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ssbp1Q9CYR0 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC11.87□□□□□ -0.51
Ssbp1Q9CYR0 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ssbp1Q9CYR0 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ssbp1Q9CYR0 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ssbp1Q9CYR0 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ssbp1Q9CYR0 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ssbp1Q9CYR0 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ssbp1Q9CYR0 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ssbp1Q9CYR0 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ssbp1Q9CYR0 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC11.87□□□□□ -0.51
Ssbp1Q9CYR0 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ssbp1Q9CYR0 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ssbp1Q9CYR0 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Ssbp1Q9CYR0 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ssbp1Q9CYR0 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC11.86□□□□□ -0.51
Ssbp1Q9CYR0 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssbp1Q9CYR0 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssbp1Q9CYR0 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssbp1Q9CYR0 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssbp1Q9CYR0 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC11.86□□□□□ -0.51
Ssbp1Q9CYR0 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ssbp1Q9CYR0 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssbp1Q9CYR0 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssbp1Q9CYR0 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC11.86□□□□□ -0.51
Ssbp1Q9CYR0 Flvcr1-202ENSMUST00000191946 1216 ntBASIC11.86□□□□□ -0.51
Ssbp1Q9CYR0 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC11.86□□□□□ -0.51
Ssbp1Q9CYR0 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssbp1Q9CYR0 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssbp1Q9CYR0 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssbp1Q9CYR0 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssbp1Q9CYR0 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssbp1Q9CYR0 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssbp1Q9CYR0 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssbp1Q9CYR0 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssbp1Q9CYR0 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Ssbp1Q9CYR0 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Ssbp1Q9CYR0 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ssbp1Q9CYR0 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ssbp1Q9CYR0 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssbp1Q9CYR0 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ssbp1Q9CYR0 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssbp1Q9CYR0 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssbp1Q9CYR0 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ssbp1Q9CYR0 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ssbp1Q9CYR0 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ssbp1Q9CYR0 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssbp1Q9CYR0 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ssbp1Q9CYR0 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Ssbp1Q9CYR0 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ssbp1Q9CYR0 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ssbp1Q9CYR0 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ssbp1Q9CYR0 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ssbp1Q9CYR0 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ssbp1Q9CYR0 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC11.85□□□□□ -0.51
Ssbp1Q9CYR0 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC11.85□□□□□ -0.51
Ssbp1Q9CYR0 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ssbp1Q9CYR0 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Ssbp1Q9CYR0 Gm12251-201ENSMUST00000117893 792 ntBASIC11.85□□□□□ -0.51
Ssbp1Q9CYR0 Smad6-203ENSMUST00000179458 273 ntBASIC11.85□□□□□ -0.51
Ssbp1Q9CYR0 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ssbp1Q9CYR0 Gm29791-202ENSMUST00000207888 369 ntBASIC11.85□□□□□ -0.51
Ssbp1Q9CYR0 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ssbp1Q9CYR0 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms