Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.55■□□□□ 0.4
Ssr1Q9CY50 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.55■□□□□ 0.4
Ssr1Q9CY50 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ssr1Q9CY50 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ssr1Q9CY50 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ssr1Q9CY50 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.55■□□□□ 0.4
Ssr1Q9CY50 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ssr1Q9CY50 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Ssr1Q9CY50 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ssr1Q9CY50 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ssr1Q9CY50 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Ssr1Q9CY50 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ssr1Q9CY50 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ssr1Q9CY50 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ssr1Q9CY50 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ssr1Q9CY50 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
Ssr1Q9CY50 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ssr1Q9CY50 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ssr1Q9CY50 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ssr1Q9CY50 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ssr1Q9CY50 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ssr1Q9CY50 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
Ssr1Q9CY50 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.54■□□□□ 0.4
Ssr1Q9CY50 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Ssr1Q9CY50 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.54■□□□□ 0.4
Ssr1Q9CY50 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ssr1Q9CY50 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ssr1Q9CY50 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ssr1Q9CY50 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ssr1Q9CY50 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ssr1Q9CY50 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ssr1Q9CY50 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ssr1Q9CY50 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Ssr1Q9CY50 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ssr1Q9CY50 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ssr1Q9CY50 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ssr1Q9CY50 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ssr1Q9CY50 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ssr1Q9CY50 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Ssr1Q9CY50 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ssr1Q9CY50 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Ssr1Q9CY50 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ssr1Q9CY50 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ssr1Q9CY50 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ssr1Q9CY50 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ssr1Q9CY50 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
Ssr1Q9CY50 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ssr1Q9CY50 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
Ssr1Q9CY50 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.53■□□□□ 0.4
Ssr1Q9CY50 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ssr1Q9CY50 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Ssr1Q9CY50 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ssr1Q9CY50 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ssr1Q9CY50 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.53■□□□□ 0.4
Ssr1Q9CY50 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Ssr1Q9CY50 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ssr1Q9CY50 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ssr1Q9CY50 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ssr1Q9CY50 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ssr1Q9CY50 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ssr1Q9CY50 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ssr1Q9CY50 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ssr1Q9CY50 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ssr1Q9CY50 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ssr1Q9CY50 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ssr1Q9CY50 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ssr1Q9CY50 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ssr1Q9CY50 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ssr1Q9CY50 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.52■□□□□ 0.4
Ssr1Q9CY50 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ssr1Q9CY50 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Ssr1Q9CY50 Gm30025-201ENSMUST00000218555 728 ntBASIC17.52■□□□□ 0.4
Ssr1Q9CY50 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Ssr1Q9CY50 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ssr1Q9CY50 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ssr1Q9CY50 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Ssr1Q9CY50 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
Ssr1Q9CY50 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.52■□□□□ 0.39
Ssr1Q9CY50 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ssr1Q9CY50 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ssr1Q9CY50 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ssr1Q9CY50 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ssr1Q9CY50 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ssr1Q9CY50 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ssr1Q9CY50 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ssr1Q9CY50 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ssr1Q9CY50 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ssr1Q9CY50 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ssr1Q9CY50 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ssr1Q9CY50 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ssr1Q9CY50 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Ssr1Q9CY50 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ssr1Q9CY50 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
Ssr1Q9CY50 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Ssr1Q9CY50 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ssr1Q9CY50 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Ssr1Q9CY50 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ssr1Q9CY50 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ssr1Q9CY50 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ssr1Q9CY50 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms