Protein–RNA interactions for Protein: Q9CWM4

Pfdn1, Prefoldin subunit 1, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1Q9CWM4 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pfdn1Q9CWM4 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC14.3□□□□□ -0.12
Pfdn1Q9CWM4 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pfdn1Q9CWM4 Gm9847-201ENSMUST00000052528 599 ntBASIC14.3□□□□□ -0.12
Pfdn1Q9CWM4 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pfdn1Q9CWM4 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pfdn1Q9CWM4 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pfdn1Q9CWM4 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Pfdn1Q9CWM4 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pfdn1Q9CWM4 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC14.3□□□□□ -0.12
Pfdn1Q9CWM4 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pfdn1Q9CWM4 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pfdn1Q9CWM4 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pfdn1Q9CWM4 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pfdn1Q9CWM4 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pfdn1Q9CWM4 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pfdn1Q9CWM4 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC14.29□□□□□ -0.12
Pfdn1Q9CWM4 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pfdn1Q9CWM4 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pfdn1Q9CWM4 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pfdn1Q9CWM4 Gm43137-201ENSMUST00000198052 594 ntBASIC14.29□□□□□ -0.12
Pfdn1Q9CWM4 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pfdn1Q9CWM4 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC14.29□□□□□ -0.12
Pfdn1Q9CWM4 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Pfdn1Q9CWM4 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.29□□□□□ -0.12
Pfdn1Q9CWM4 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC14.29□□□□□ -0.12
Pfdn1Q9CWM4 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.29□□□□□ -0.12
Pfdn1Q9CWM4 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pfdn1Q9CWM4 Tfap2a-209ENSMUST00000225180 1828 ntBASIC14.29□□□□□ -0.12
Pfdn1Q9CWM4 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pfdn1Q9CWM4 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pfdn1Q9CWM4 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pfdn1Q9CWM4 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pfdn1Q9CWM4 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.29□□□□□ -0.12
Pfdn1Q9CWM4 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pfdn1Q9CWM4 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.28□□□□□ -0.12
Pfdn1Q9CWM4 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pfdn1Q9CWM4 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pfdn1Q9CWM4 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pfdn1Q9CWM4 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pfdn1Q9CWM4 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pfdn1Q9CWM4 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pfdn1Q9CWM4 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Pfdn1Q9CWM4 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC14.28□□□□□ -0.12
Pfdn1Q9CWM4 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pfdn1Q9CWM4 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pfdn1Q9CWM4 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pfdn1Q9CWM4 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pfdn1Q9CWM4 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pfdn1Q9CWM4 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pfdn1Q9CWM4 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pfdn1Q9CWM4 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pfdn1Q9CWM4 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pfdn1Q9CWM4 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Pfdn1Q9CWM4 Gm5812-201ENSMUST00000061073 957 ntBASIC14.28□□□□□ -0.12
Pfdn1Q9CWM4 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pfdn1Q9CWM4 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.28□□□□□ -0.12
Pfdn1Q9CWM4 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pfdn1Q9CWM4 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Pfdn1Q9CWM4 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pfdn1Q9CWM4 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pfdn1Q9CWM4 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pfdn1Q9CWM4 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pfdn1Q9CWM4 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Pfdn1Q9CWM4 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Pfdn1Q9CWM4 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pfdn1Q9CWM4 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pfdn1Q9CWM4 Cap2-205ENSMUST00000225824 1634 ntBASIC14.27□□□□□ -0.12
Pfdn1Q9CWM4 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pfdn1Q9CWM4 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pfdn1Q9CWM4 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Pfdn1Q9CWM4 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pfdn1Q9CWM4 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC14.27□□□□□ -0.12
Pfdn1Q9CWM4 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC14.27□□□□□ -0.13
Pfdn1Q9CWM4 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pfdn1Q9CWM4 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC14.27□□□□□ -0.13
Pfdn1Q9CWM4 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pfdn1Q9CWM4 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pfdn1Q9CWM4 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pfdn1Q9CWM4 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pfdn1Q9CWM4 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pfdn1Q9CWM4 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Pfdn1Q9CWM4 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.27□□□□□ -0.13
Pfdn1Q9CWM4 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pfdn1Q9CWM4 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pfdn1Q9CWM4 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pfdn1Q9CWM4 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pfdn1Q9CWM4 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pfdn1Q9CWM4 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pfdn1Q9CWM4 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Pfdn1Q9CWM4 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pfdn1Q9CWM4 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pfdn1Q9CWM4 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pfdn1Q9CWM4 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pfdn1Q9CWM4 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pfdn1Q9CWM4 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Pfdn1Q9CWM4 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Pfdn1Q9CWM4 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pfdn1Q9CWM4 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pfdn1Q9CWM4 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms