Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chchd1Q9CQA6 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chchd1Q9CQA6 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chchd1Q9CQA6 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Chchd1Q9CQA6 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Chchd1Q9CQA6 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chchd1Q9CQA6 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chchd1Q9CQA6 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Chchd1Q9CQA6 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Chchd1Q9CQA6 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Chchd1Q9CQA6 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Chchd1Q9CQA6 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Chchd1Q9CQA6 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Chchd1Q9CQA6 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Chchd1Q9CQA6 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Chchd1Q9CQA6 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Chchd1Q9CQA6 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC12.27□□□□□ -0.44
Chchd1Q9CQA6 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Chchd1Q9CQA6 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Chchd1Q9CQA6 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Chchd1Q9CQA6 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.45
Chchd1Q9CQA6 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Chchd1Q9CQA6 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Chchd1Q9CQA6 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC12.27□□□□□ -0.45
Chchd1Q9CQA6 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Chchd1Q9CQA6 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Chchd1Q9CQA6 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Chchd1Q9CQA6 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Chchd1Q9CQA6 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Chchd1Q9CQA6 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Chchd1Q9CQA6 Gm16425-201ENSMUST00000118143 3130 ntBASIC12.27□□□□□ -0.45
Chchd1Q9CQA6 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Chchd1Q9CQA6 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Chchd1Q9CQA6 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Chchd1Q9CQA6 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC12.27□□□□□ -0.45
Chchd1Q9CQA6 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Chchd1Q9CQA6 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Chchd1Q9CQA6 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Chchd1Q9CQA6 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Chchd1Q9CQA6 Tfap2a-203ENSMUST00000223869 2037 ntBASIC12.27□□□□□ -0.45
Chchd1Q9CQA6 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Chchd1Q9CQA6 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chchd1Q9CQA6 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chchd1Q9CQA6 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chchd1Q9CQA6 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chchd1Q9CQA6 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Chchd1Q9CQA6 AC159649.2-201ENSMUST00000222984 3223 ntBASIC12.26□□□□□ -0.45
Chchd1Q9CQA6 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chchd1Q9CQA6 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Chchd1Q9CQA6 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Chchd1Q9CQA6 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chchd1Q9CQA6 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Chchd1Q9CQA6 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chchd1Q9CQA6 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Chchd1Q9CQA6 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Chchd1Q9CQA6 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC12.26□□□□□ -0.45
Chchd1Q9CQA6 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC12.26□□□□□ -0.45
Chchd1Q9CQA6 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Chchd1Q9CQA6 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Chchd1Q9CQA6 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC12.26□□□□□ -0.45
Chchd1Q9CQA6 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.26□□□□□ -0.45
Chchd1Q9CQA6 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chchd1Q9CQA6 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chchd1Q9CQA6 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Chchd1Q9CQA6 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Chchd1Q9CQA6 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chchd1Q9CQA6 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chchd1Q9CQA6 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC12.26□□□□□ -0.45
Chchd1Q9CQA6 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Chchd1Q9CQA6 BC037039-201ENSMUST00000192003 2205 ntBASIC12.26□□□□□ -0.45
Chchd1Q9CQA6 Gm37728-201ENSMUST00000195025 2292 ntBASIC12.26□□□□□ -0.45
Chchd1Q9CQA6 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC12.26□□□□□ -0.45
Chchd1Q9CQA6 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chchd1Q9CQA6 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC12.26□□□□□ -0.45
Chchd1Q9CQA6 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chchd1Q9CQA6 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chchd1Q9CQA6 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chchd1Q9CQA6 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chchd1Q9CQA6 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.25□□□□□ -0.45
Chchd1Q9CQA6 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC12.25□□□□□ -0.45
Chchd1Q9CQA6 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chchd1Q9CQA6 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chchd1Q9CQA6 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chchd1Q9CQA6 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chchd1Q9CQA6 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chchd1Q9CQA6 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Chchd1Q9CQA6 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chchd1Q9CQA6 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chchd1Q9CQA6 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chchd1Q9CQA6 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC12.25□□□□□ -0.45
Chchd1Q9CQA6 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chchd1Q9CQA6 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Chchd1Q9CQA6 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chchd1Q9CQA6 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chchd1Q9CQA6 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chchd1Q9CQA6 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chchd1Q9CQA6 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chchd1Q9CQA6 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Chchd1Q9CQA6 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chchd1Q9CQA6 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms