Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Msh4Q99MT2 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
Msh4Q99MT2 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Msh4Q99MT2 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Msh4Q99MT2 Gm6190-201ENSMUST00000220683 1374 ntBASIC15.77■□□□□ 0.12
Msh4Q99MT2 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Msh4Q99MT2 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Msh4Q99MT2 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Msh4Q99MT2 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Msh4Q99MT2 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Msh4Q99MT2 Mir770-201ENSMUST00000103252 94 ntBASIC15.77■□□□□ 0.12
Msh4Q99MT2 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC15.77■□□□□ 0.12
Msh4Q99MT2 Gm14859-201ENSMUST00000117752 357 ntBASIC15.77■□□□□ 0.12
Msh4Q99MT2 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Msh4Q99MT2 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC15.77■□□□□ 0.12
Msh4Q99MT2 AC154471.1-201ENSMUST00000224418 436 ntBASIC15.77■□□□□ 0.12
Msh4Q99MT2 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Msh4Q99MT2 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Msh4Q99MT2 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Msh4Q99MT2 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15.77■□□□□ 0.11
Msh4Q99MT2 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Msh4Q99MT2 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Msh4Q99MT2 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Msh4Q99MT2 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Msh4Q99MT2 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Msh4Q99MT2 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Msh4Q99MT2 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Msh4Q99MT2 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Msh4Q99MT2 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Msh4Q99MT2 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Msh4Q99MT2 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Msh4Q99MT2 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Msh4Q99MT2 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Msh4Q99MT2 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Msh4Q99MT2 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Msh4Q99MT2 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Msh4Q99MT2 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Msh4Q99MT2 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Msh4Q99MT2 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Msh4Q99MT2 Gm11336-201ENSMUST00000118168 334 ntBASIC15.76■□□□□ 0.11
Msh4Q99MT2 Gm11950-201ENSMUST00000121615 838 ntBASIC15.76■□□□□ 0.11
Msh4Q99MT2 Gm7284-201ENSMUST00000131667 944 ntBASIC15.76■□□□□ 0.11
Msh4Q99MT2 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC15.76■□□□□ 0.11
Msh4Q99MT2 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
Msh4Q99MT2 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Msh4Q99MT2 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC15.76■□□□□ 0.11
Msh4Q99MT2 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Msh4Q99MT2 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Msh4Q99MT2 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.76■□□□□ 0.11
Msh4Q99MT2 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Msh4Q99MT2 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Msh4Q99MT2 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Msh4Q99MT2 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Msh4Q99MT2 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Msh4Q99MT2 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Msh4Q99MT2 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Msh4Q99MT2 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Msh4Q99MT2 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Msh4Q99MT2 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Msh4Q99MT2 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Msh4Q99MT2 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.75■□□□□ 0.11
Msh4Q99MT2 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Msh4Q99MT2 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Msh4Q99MT2 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC15.75■□□□□ 0.11
Msh4Q99MT2 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Msh4Q99MT2 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Msh4Q99MT2 Gm6623-201ENSMUST00000173570 544 ntBASIC15.75■□□□□ 0.11
Msh4Q99MT2 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
Msh4Q99MT2 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Msh4Q99MT2 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Msh4Q99MT2 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Msh4Q99MT2 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Msh4Q99MT2 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Msh4Q99MT2 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Msh4Q99MT2 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Msh4Q99MT2 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Msh4Q99MT2 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
Msh4Q99MT2 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Msh4Q99MT2 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Msh4Q99MT2 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Msh4Q99MT2 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Msh4Q99MT2 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Msh4Q99MT2 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Msh4Q99MT2 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Msh4Q99MT2 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Msh4Q99MT2 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Msh4Q99MT2 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC15.74■□□□□ 0.11
Msh4Q99MT2 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Msh4Q99MT2 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
Msh4Q99MT2 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Msh4Q99MT2 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Msh4Q99MT2 Gm18115-201ENSMUST00000221209 621 ntBASIC15.74■□□□□ 0.11
Msh4Q99MT2 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Msh4Q99MT2 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Msh4Q99MT2 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Msh4Q99MT2 Gm10819-201ENSMUST00000099988 561 ntBASIC15.74■□□□□ 0.11
Msh4Q99MT2 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
Msh4Q99MT2 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Msh4Q99MT2 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Msh4Q99MT2 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms