Protein–RNA interactions for Protein: Q99MS8

Tpgs1, Tubulin polyglutamylase complex subunit 1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpgs1Q99MS8 Gm10819-201ENSMUST00000099988 561 ntBASIC16.83■□□□□ 0.28
Tpgs1Q99MS8 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tpgs1Q99MS8 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tpgs1Q99MS8 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Tpgs1Q99MS8 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tpgs1Q99MS8 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tpgs1Q99MS8 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Tpgs1Q99MS8 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tpgs1Q99MS8 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tpgs1Q99MS8 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tpgs1Q99MS8 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tpgs1Q99MS8 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tpgs1Q99MS8 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tpgs1Q99MS8 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tpgs1Q99MS8 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Tpgs1Q99MS8 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Tpgs1Q99MS8 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Tpgs1Q99MS8 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC16.82■□□□□ 0.28
Tpgs1Q99MS8 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC16.82■□□□□ 0.28
Tpgs1Q99MS8 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tpgs1Q99MS8 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Tpgs1Q99MS8 Gm9172-201ENSMUST00000212092 954 ntBASIC16.82■□□□□ 0.28
Tpgs1Q99MS8 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.82■□□□□ 0.28
Tpgs1Q99MS8 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tpgs1Q99MS8 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tpgs1Q99MS8 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
Tpgs1Q99MS8 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Tpgs1Q99MS8 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tpgs1Q99MS8 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Tpgs1Q99MS8 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Tpgs1Q99MS8 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Tpgs1Q99MS8 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Tpgs1Q99MS8 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tpgs1Q99MS8 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tpgs1Q99MS8 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tpgs1Q99MS8 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tpgs1Q99MS8 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.81■□□□□ 0.28
Tpgs1Q99MS8 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Tpgs1Q99MS8 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tpgs1Q99MS8 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC16.81■□□□□ 0.28
Tpgs1Q99MS8 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
Tpgs1Q99MS8 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC16.81■□□□□ 0.28
Tpgs1Q99MS8 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Tpgs1Q99MS8 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
Tpgs1Q99MS8 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.81■□□□□ 0.28
Tpgs1Q99MS8 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC16.81■□□□□ 0.28
Tpgs1Q99MS8 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tpgs1Q99MS8 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Tpgs1Q99MS8 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tpgs1Q99MS8 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Tpgs1Q99MS8 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tpgs1Q99MS8 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Tpgs1Q99MS8 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tpgs1Q99MS8 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tpgs1Q99MS8 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tpgs1Q99MS8 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tpgs1Q99MS8 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Tpgs1Q99MS8 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.8■□□□□ 0.28
Tpgs1Q99MS8 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tpgs1Q99MS8 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tpgs1Q99MS8 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Tpgs1Q99MS8 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tpgs1Q99MS8 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Tpgs1Q99MS8 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tpgs1Q99MS8 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tpgs1Q99MS8 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
Tpgs1Q99MS8 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tpgs1Q99MS8 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tpgs1Q99MS8 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tpgs1Q99MS8 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tpgs1Q99MS8 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tpgs1Q99MS8 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tpgs1Q99MS8 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tpgs1Q99MS8 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tpgs1Q99MS8 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tpgs1Q99MS8 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tpgs1Q99MS8 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tpgs1Q99MS8 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tpgs1Q99MS8 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.79■□□□□ 0.28
Tpgs1Q99MS8 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tpgs1Q99MS8 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tpgs1Q99MS8 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tpgs1Q99MS8 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tpgs1Q99MS8 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tpgs1Q99MS8 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC16.79■□□□□ 0.28
Tpgs1Q99MS8 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.79■□□□□ 0.28
Tpgs1Q99MS8 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC16.79■□□□□ 0.28
Tpgs1Q99MS8 Gm27867-201ENSMUST00000184778 125 ntBASIC16.79■□□□□ 0.28
Tpgs1Q99MS8 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tpgs1Q99MS8 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tpgs1Q99MS8 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tpgs1Q99MS8 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tpgs1Q99MS8 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tpgs1Q99MS8 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tpgs1Q99MS8 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Tpgs1Q99MS8 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tpgs1Q99MS8 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Tpgs1Q99MS8 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Tpgs1Q99MS8 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tpgs1Q99MS8 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms