Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC15.11■□□□□ 0.01
Nkx6-1Q99MA9 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx6-1Q99MA9 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx6-1Q99MA9 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx6-1Q99MA9 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC15.11■□□□□ 0.01
Nkx6-1Q99MA9 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx6-1Q99MA9 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx6-1Q99MA9 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx6-1Q99MA9 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx6-1Q99MA9 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx6-1Q99MA9 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Nkx6-1Q99MA9 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx6-1Q99MA9 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx6-1Q99MA9 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx6-1Q99MA9 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx6-1Q99MA9 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx6-1Q99MA9 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx6-1Q99MA9 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC15.1■□□□□ 0.01
Nkx6-1Q99MA9 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nkx6-1Q99MA9 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nkx6-1Q99MA9 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nkx6-1Q99MA9 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Nkx6-1Q99MA9 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nkx6-1Q99MA9 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nkx6-1Q99MA9 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Nkx6-1Q99MA9 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nkx6-1Q99MA9 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Nkx6-1Q99MA9 Gm25406-201ENSMUST00000157599 105 ntBASIC15.1■□□□□ 0.01
Nkx6-1Q99MA9 Gm17271-201ENSMUST00000165535 355 ntBASIC15.1■□□□□ 0.01
Nkx6-1Q99MA9 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC15.1■□□□□ 0.01
Nkx6-1Q99MA9 Gm7229-201ENSMUST00000214719 1007 ntBASIC15.1■□□□□ 0.01
Nkx6-1Q99MA9 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Nkx6-1Q99MA9 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC15.1■□□□□ 0.01
Nkx6-1Q99MA9 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nkx6-1Q99MA9 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nkx6-1Q99MA9 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nkx6-1Q99MA9 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Nkx6-1Q99MA9 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nkx6-1Q99MA9 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nkx6-1Q99MA9 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nkx6-1Q99MA9 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Nkx6-1Q99MA9 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nkx6-1Q99MA9 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nkx6-1Q99MA9 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Nkx6-1Q99MA9 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Nkx6-1Q99MA9 Gm16499-203ENSMUST00000204633 2177 ntBASIC15.09■□□□□ 0.01
Nkx6-1Q99MA9 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nkx6-1Q99MA9 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC15.09■□□□□ 0.01
Nkx6-1Q99MA9 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nkx6-1Q99MA9 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nkx6-1Q99MA9 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Nkx6-1Q99MA9 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Nkx6-1Q99MA9 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nkx6-1Q99MA9 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Nkx6-1Q99MA9 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nkx6-1Q99MA9 Gm37811-201ENSMUST00000192416 2601 ntBASIC15.09■□□□□ 0.01
Nkx6-1Q99MA9 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nkx6-1Q99MA9 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC15.09■□□□□ 0.01
Nkx6-1Q99MA9 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Nkx6-1Q99MA9 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC15.09■□□□□ 0.01
Nkx6-1Q99MA9 Gm44872-201ENSMUST00000207864 420 ntBASIC15.09■□□□□ 0.01
Nkx6-1Q99MA9 AC159114.1-201ENSMUST00000220349 266 ntBASIC15.09■□□□□ 0.01
Nkx6-1Q99MA9 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Nkx6-1Q99MA9 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nkx6-1Q99MA9 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Nkx6-1Q99MA9 Gm11873-201ENSMUST00000117877 1304 ntBASIC15.09■□□□□ 0.01
Nkx6-1Q99MA9 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Nkx6-1Q99MA9 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nkx6-1Q99MA9 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Nkx6-1Q99MA9 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC15.08■□□□□ 0.01
Nkx6-1Q99MA9 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Nkx6-1Q99MA9 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Nkx6-1Q99MA9 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Nkx6-1Q99MA9 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Nkx6-1Q99MA9 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Nkx6-1Q99MA9 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Nkx6-1Q99MA9 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Nkx6-1Q99MA9 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Nkx6-1Q99MA9 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Nkx6-1Q99MA9 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Nkx6-1Q99MA9 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC15.08■□□□□ 0.01
Nkx6-1Q99MA9 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Nkx6-1Q99MA9 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Nkx6-1Q99MA9 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Nkx6-1Q99MA9 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Nkx6-1Q99MA9 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
Nkx6-1Q99MA9 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Nkx6-1Q99MA9 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Nkx6-1Q99MA9 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Nkx6-1Q99MA9 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC15.08■□□□□ 0
Nkx6-1Q99MA9 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
Nkx6-1Q99MA9 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Nkx6-1Q99MA9 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC15.08■□□□□ 0
Nkx6-1Q99MA9 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Nkx6-1Q99MA9 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Nkx6-1Q99MA9 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Nkx6-1Q99MA9 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Nkx6-1Q99MA9 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC15.07■□□□□ 0
Nkx6-1Q99MA9 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC15.07■□□□□ 0
Nkx6-1Q99MA9 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms