Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdk9Q99J95 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cdk9Q99J95 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdk9Q99J95 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cdk9Q99J95 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdk9Q99J95 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cdk9Q99J95 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC16.33■□□□□ 0.2
Cdk9Q99J95 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdk9Q99J95 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdk9Q99J95 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdk9Q99J95 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdk9Q99J95 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Cdk9Q99J95 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.32■□□□□ 0.2
Cdk9Q99J95 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cdk9Q99J95 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cdk9Q99J95 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC16.32■□□□□ 0.2
Cdk9Q99J95 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
Cdk9Q99J95 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.32■□□□□ 0.2
Cdk9Q99J95 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
Cdk9Q99J95 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdk9Q99J95 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdk9Q99J95 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Cdk9Q99J95 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdk9Q99J95 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdk9Q99J95 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdk9Q99J95 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cdk9Q99J95 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdk9Q99J95 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdk9Q99J95 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.31■□□□□ 0.2
Cdk9Q99J95 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdk9Q99J95 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdk9Q99J95 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdk9Q99J95 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cdk9Q99J95 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdk9Q99J95 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdk9Q99J95 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdk9Q99J95 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC16.31■□□□□ 0.2
Cdk9Q99J95 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cdk9Q99J95 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.31■□□□□ 0.2
Cdk9Q99J95 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdk9Q99J95 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdk9Q99J95 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdk9Q99J95 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdk9Q99J95 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdk9Q99J95 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdk9Q99J95 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Cdk9Q99J95 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdk9Q99J95 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Cdk9Q99J95 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdk9Q99J95 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdk9Q99J95 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Cdk9Q99J95 Nrn1-203ENSMUST00000223611 1443 ntBASIC16.3■□□□□ 0.2
Cdk9Q99J95 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdk9Q99J95 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdk9Q99J95 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cdk9Q99J95 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdk9Q99J95 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC16.3■□□□□ 0.2
Cdk9Q99J95 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdk9Q99J95 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdk9Q99J95 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdk9Q99J95 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdk9Q99J95 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.3■□□□□ 0.2
Cdk9Q99J95 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdk9Q99J95 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdk9Q99J95 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Cdk9Q99J95 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdk9Q99J95 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cdk9Q99J95 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Cdk9Q99J95 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Cdk9Q99J95 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Cdk9Q99J95 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdk9Q99J95 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC16.29■□□□□ 0.2
Cdk9Q99J95 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdk9Q99J95 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.29■□□□□ 0.2
Cdk9Q99J95 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdk9Q99J95 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdk9Q99J95 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdk9Q99J95 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Cdk9Q99J95 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Cdk9Q99J95 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.29■□□□□ 0.2
Cdk9Q99J95 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.29■□□□□ 0.2
Cdk9Q99J95 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC16.29■□□□□ 0.2
Cdk9Q99J95 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cdk9Q99J95 Gm27000-201ENSMUST00000182943 842 ntBASIC16.29■□□□□ 0.2
Cdk9Q99J95 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cdk9Q99J95 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC16.29■□□□□ 0.2
Cdk9Q99J95 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdk9Q99J95 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdk9Q99J95 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdk9Q99J95 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
Cdk9Q99J95 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdk9Q99J95 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Cdk9Q99J95 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdk9Q99J95 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Cdk9Q99J95 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cdk9Q99J95 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cdk9Q99J95 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cdk9Q99J95 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cdk9Q99J95 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.28■□□□□ 0.2
Cdk9Q99J95 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms