Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp1aQ921W0 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp1aQ921W0 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp1aQ921W0 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Chmp1aQ921W0 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp1aQ921W0 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp1aQ921W0 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Chmp1aQ921W0 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC14.31□□□□□ -0.12
Chmp1aQ921W0 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp1aQ921W0 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp1aQ921W0 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.31□□□□□ -0.12
Chmp1aQ921W0 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp1aQ921W0 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp1aQ921W0 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC14.31□□□□□ -0.12
Chmp1aQ921W0 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC14.31□□□□□ -0.12
Chmp1aQ921W0 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp1aQ921W0 Gm18958-201ENSMUST00000174258 762 ntBASIC14.31□□□□□ -0.12
Chmp1aQ921W0 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Chmp1aQ921W0 Gm8495-201ENSMUST00000188740 694 ntBASIC14.31□□□□□ -0.12
Chmp1aQ921W0 Gm43183-201ENSMUST00000200632 547 ntBASIC14.31□□□□□ -0.12
Chmp1aQ921W0 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp1aQ921W0 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC14.31□□□□□ -0.12
Chmp1aQ921W0 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp1aQ921W0 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Chmp1aQ921W0 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp1aQ921W0 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp1aQ921W0 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
Chmp1aQ921W0 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp1aQ921W0 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp1aQ921W0 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp1aQ921W0 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Chmp1aQ921W0 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp1aQ921W0 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp1aQ921W0 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14.31□□□□□ -0.12
Chmp1aQ921W0 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp1aQ921W0 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp1aQ921W0 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.3□□□□□ -0.12
Chmp1aQ921W0 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp1aQ921W0 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp1aQ921W0 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp1aQ921W0 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp1aQ921W0 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp1aQ921W0 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp1aQ921W0 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp1aQ921W0 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp1aQ921W0 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp1aQ921W0 Gm18666-201ENSMUST00000190039 958 ntBASIC14.3□□□□□ -0.12
Chmp1aQ921W0 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC14.3□□□□□ -0.12
Chmp1aQ921W0 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp1aQ921W0 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp1aQ921W0 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp1aQ921W0 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp1aQ921W0 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp1aQ921W0 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp1aQ921W0 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp1aQ921W0 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp1aQ921W0 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp1aQ921W0 Sybu-209ENSMUST00000228639 4113 ntBASIC14.3□□□□□ -0.12
Chmp1aQ921W0 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp1aQ921W0 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Chmp1aQ921W0 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp1aQ921W0 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp1aQ921W0 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp1aQ921W0 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp1aQ921W0 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
Chmp1aQ921W0 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp1aQ921W0 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.29□□□□□ -0.12
Chmp1aQ921W0 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp1aQ921W0 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp1aQ921W0 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp1aQ921W0 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp1aQ921W0 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Chmp1aQ921W0 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp1aQ921W0 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp1aQ921W0 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC14.29□□□□□ -0.12
Chmp1aQ921W0 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp1aQ921W0 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp1aQ921W0 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp1aQ921W0 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Chmp1aQ921W0 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp1aQ921W0 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp1aQ921W0 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp1aQ921W0 Wnt10b-204ENSMUST00000226655 1807 ntBASIC14.29□□□□□ -0.12
Chmp1aQ921W0 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp1aQ921W0 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp1aQ921W0 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.29□□□□□ -0.12
Chmp1aQ921W0 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp1aQ921W0 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp1aQ921W0 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp1aQ921W0 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Chmp1aQ921W0 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
Chmp1aQ921W0 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp1aQ921W0 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC14.28□□□□□ -0.12
Chmp1aQ921W0 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp1aQ921W0 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Chmp1aQ921W0 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp1aQ921W0 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp1aQ921W0 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp1aQ921W0 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp1aQ921W0 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms