Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smc1bQ920F6 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smc1bQ920F6 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smc1bQ920F6 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smc1bQ920F6 Gm13186-201ENSMUST00000118031 316 ntBASIC18.6■□□□□ 0.57
Smc1bQ920F6 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC18.6■□□□□ 0.57
Smc1bQ920F6 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Smc1bQ920F6 Gm10060-201ENSMUST00000212002 111 ntBASIC18.6■□□□□ 0.57
Smc1bQ920F6 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smc1bQ920F6 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smc1bQ920F6 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smc1bQ920F6 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Smc1bQ920F6 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smc1bQ920F6 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smc1bQ920F6 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smc1bQ920F6 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Smc1bQ920F6 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smc1bQ920F6 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smc1bQ920F6 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smc1bQ920F6 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Smc1bQ920F6 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Smc1bQ920F6 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Smc1bQ920F6 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smc1bQ920F6 Gm13312-201ENSMUST00000119631 718 ntBASIC18.59■□□□□ 0.57
Smc1bQ920F6 Mir8112-201ENSMUST00000184382 131 ntBASIC18.59■□□□□ 0.57
Smc1bQ920F6 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC18.59■□□□□ 0.57
Smc1bQ920F6 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC18.59■□□□□ 0.57
Smc1bQ920F6 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smc1bQ920F6 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smc1bQ920F6 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smc1bQ920F6 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Smc1bQ920F6 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Smc1bQ920F6 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smc1bQ920F6 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Smc1bQ920F6 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Smc1bQ920F6 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Smc1bQ920F6 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Smc1bQ920F6 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Smc1bQ920F6 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Smc1bQ920F6 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smc1bQ920F6 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Smc1bQ920F6 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC18.58■□□□□ 0.56
Smc1bQ920F6 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC18.58■□□□□ 0.56
Smc1bQ920F6 Gm27702-201ENSMUST00000184512 56 ntBASIC18.58■□□□□ 0.56
Smc1bQ920F6 Gm5264-201ENSMUST00000190584 848 ntBASIC18.58■□□□□ 0.56
Smc1bQ920F6 Gm13830-205ENSMUST00000201195 1155 ntBASIC18.58■□□□□ 0.56
Smc1bQ920F6 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smc1bQ920F6 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smc1bQ920F6 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Smc1bQ920F6 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smc1bQ920F6 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Smc1bQ920F6 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smc1bQ920F6 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.58■□□□□ 0.56
Smc1bQ920F6 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smc1bQ920F6 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smc1bQ920F6 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Smc1bQ920F6 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smc1bQ920F6 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smc1bQ920F6 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smc1bQ920F6 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Smc1bQ920F6 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smc1bQ920F6 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smc1bQ920F6 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smc1bQ920F6 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC18.57■□□□□ 0.56
Smc1bQ920F6 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Smc1bQ920F6 Gm11841-201ENSMUST00000117060 1963 ntBASIC18.57■□□□□ 0.56
Smc1bQ920F6 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Smc1bQ920F6 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smc1bQ920F6 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smc1bQ920F6 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Smc1bQ920F6 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smc1bQ920F6 Gm6736-201ENSMUST00000166583 948 ntBASIC18.57■□□□□ 0.56
Smc1bQ920F6 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC18.57■□□□□ 0.56
Smc1bQ920F6 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Smc1bQ920F6 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC18.57■□□□□ 0.56
Smc1bQ920F6 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC18.57■□□□□ 0.56
Smc1bQ920F6 AC154621.1-201ENSMUST00000226155 1119 ntBASIC18.57■□□□□ 0.56
Smc1bQ920F6 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smc1bQ920F6 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smc1bQ920F6 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smc1bQ920F6 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Smc1bQ920F6 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Smc1bQ920F6 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Smc1bQ920F6 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Smc1bQ920F6 Gm18856-201ENSMUST00000178096 1374 ntBASIC18.56■□□□□ 0.56
Smc1bQ920F6 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC18.56■□□□□ 0.56
Smc1bQ920F6 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smc1bQ920F6 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smc1bQ920F6 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.56■□□□□ 0.56
Smc1bQ920F6 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smc1bQ920F6 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smc1bQ920F6 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smc1bQ920F6 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Smc1bQ920F6 Gm44357-201ENSMUST00000195897 142 ntBASIC18.56■□□□□ 0.56
Smc1bQ920F6 Gm19658-201ENSMUST00000196231 138 ntBASIC18.56■□□□□ 0.56
Smc1bQ920F6 Gm44367-201ENSMUST00000196836 138 ntBASIC18.56■□□□□ 0.56
Smc1bQ920F6 Gm44350-201ENSMUST00000197197 138 ntBASIC18.56■□□□□ 0.56
Smc1bQ920F6 Gm44390-201ENSMUST00000197533 144 ntBASIC18.56■□□□□ 0.56
Smc1bQ920F6 Gm44313-201ENSMUST00000198018 138 ntBASIC18.56■□□□□ 0.56
Smc1bQ920F6 Gm44486-201ENSMUST00000198508 138 ntBASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms