Protein–RNA interactions for Protein: Q91Y06

Pcdhb13, Protocadherin beta 13, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb13Q91Y06 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb13Q91Y06 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb13Q91Y06 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.31■□□□□ 0.2
Pcdhb13Q91Y06 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.31■□□□□ 0.2
Pcdhb13Q91Y06 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb13Q91Y06 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb13Q91Y06 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb13Q91Y06 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Pcdhb13Q91Y06 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.31■□□□□ 0.2
Pcdhb13Q91Y06 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb13Q91Y06 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb13Q91Y06 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb13Q91Y06 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb13Q91Y06 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.3■□□□□ 0.2
Pcdhb13Q91Y06 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Pcdhb13Q91Y06 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb13Q91Y06 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb13Q91Y06 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Pcdhb13Q91Y06 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb13Q91Y06 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb13Q91Y06 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb13Q91Y06 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.3■□□□□ 0.2
Pcdhb13Q91Y06 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.3■□□□□ 0.2
Pcdhb13Q91Y06 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb13Q91Y06 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb13Q91Y06 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb13Q91Y06 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb13Q91Y06 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb13Q91Y06 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Pcdhb13Q91Y06 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
Pcdhb13Q91Y06 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.3■□□□□ 0.2
Pcdhb13Q91Y06 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb13Q91Y06 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Pcdhb13Q91Y06 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb13Q91Y06 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb13Q91Y06 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.3■□□□□ 0.2
Pcdhb13Q91Y06 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb13Q91Y06 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb13Q91Y06 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb13Q91Y06 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.29■□□□□ 0.2
Pcdhb13Q91Y06 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb13Q91Y06 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb13Q91Y06 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb13Q91Y06 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb13Q91Y06 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.29■□□□□ 0.2
Pcdhb13Q91Y06 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb13Q91Y06 Mir770-201ENSMUST00000103252 94 ntBASIC16.29■□□□□ 0.2
Pcdhb13Q91Y06 Gm9013-201ENSMUST00000132939 882 ntBASIC16.29■□□□□ 0.2
Pcdhb13Q91Y06 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.29■□□□□ 0.2
Pcdhb13Q91Y06 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Pcdhb13Q91Y06 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb13Q91Y06 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb13Q91Y06 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Pcdhb13Q91Y06 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Pcdhb13Q91Y06 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb13Q91Y06 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb13Q91Y06 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb13Q91Y06 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb13Q91Y06 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb13Q91Y06 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb13Q91Y06 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb13Q91Y06 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb13Q91Y06 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Pcdhb13Q91Y06 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb13Q91Y06 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb13Q91Y06 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb13Q91Y06 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb13Q91Y06 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb13Q91Y06 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb13Q91Y06 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb13Q91Y06 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb13Q91Y06 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.28■□□□□ 0.2
Pcdhb13Q91Y06 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb13Q91Y06 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb13Q91Y06 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.28■□□□□ 0.2
Pcdhb13Q91Y06 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.28■□□□□ 0.2
Pcdhb13Q91Y06 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb13Q91Y06 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb13Q91Y06 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Pcdhb13Q91Y06 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Pcdhb13Q91Y06 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Pcdhb13Q91Y06 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb13Q91Y06 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.28■□□□□ 0.2
Pcdhb13Q91Y06 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
Pcdhb13Q91Y06 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Pcdhb13Q91Y06 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb13Q91Y06 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb13Q91Y06 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb13Q91Y06 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb13Q91Y06 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb13Q91Y06 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb13Q91Y06 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb13Q91Y06 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.27■□□□□ 0.2
Pcdhb13Q91Y06 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb13Q91Y06 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb13Q91Y06 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb13Q91Y06 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Pcdhb13Q91Y06 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb13Q91Y06 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb13Q91Y06 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms