Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Pcdhb2Q91Y00 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb2Q91Y00 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb2Q91Y00 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC17.17■□□□□ 0.34
Pcdhb2Q91Y00 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb2Q91Y00 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Pcdhb2Q91Y00 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb2Q91Y00 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb2Q91Y00 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb2Q91Y00 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb2Q91Y00 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb2Q91Y00 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb2Q91Y00 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb2Q91Y00 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Pcdhb2Q91Y00 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb2Q91Y00 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb2Q91Y00 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb2Q91Y00 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Pcdhb2Q91Y00 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC17.16■□□□□ 0.34
Pcdhb2Q91Y00 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Pcdhb2Q91Y00 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC17.16■□□□□ 0.34
Pcdhb2Q91Y00 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb2Q91Y00 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Pcdhb2Q91Y00 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb2Q91Y00 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Pcdhb2Q91Y00 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb2Q91Y00 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb2Q91Y00 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Pcdhb2Q91Y00 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
Pcdhb2Q91Y00 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb2Q91Y00 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb2Q91Y00 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
Pcdhb2Q91Y00 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb2Q91Y00 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb2Q91Y00 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb2Q91Y00 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb2Q91Y00 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb2Q91Y00 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb2Q91Y00 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb2Q91Y00 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb2Q91Y00 Gm13216-201ENSMUST00000117145 591 ntBASIC17.15■□□□□ 0.34
Pcdhb2Q91Y00 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC17.15■□□□□ 0.34
Pcdhb2Q91Y00 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC17.15■□□□□ 0.34
Pcdhb2Q91Y00 AC153889.1-201ENSMUST00000219257 330 ntBASIC17.15■□□□□ 0.34
Pcdhb2Q91Y00 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb2Q91Y00 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb2Q91Y00 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb2Q91Y00 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb2Q91Y00 Gm9889-202ENSMUST00000206983 1577 ntBASIC17.15■□□□□ 0.34
Pcdhb2Q91Y00 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb2Q91Y00 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb2Q91Y00 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb2Q91Y00 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Pcdhb2Q91Y00 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb2Q91Y00 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb2Q91Y00 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb2Q91Y00 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb2Q91Y00 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
Pcdhb2Q91Y00 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC17.14■□□□□ 0.33
Pcdhb2Q91Y00 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
Pcdhb2Q91Y00 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb2Q91Y00 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb2Q91Y00 Gm12895-201ENSMUST00000122214 226 ntBASIC17.14■□□□□ 0.33
Pcdhb2Q91Y00 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC17.14■□□□□ 0.33
Pcdhb2Q91Y00 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
Pcdhb2Q91Y00 AC108846.1-201ENSMUST00000214531 513 ntBASIC17.14■□□□□ 0.33
Pcdhb2Q91Y00 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.14■□□□□ 0.33
Pcdhb2Q91Y00 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb2Q91Y00 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb2Q91Y00 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb2Q91Y00 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb2Q91Y00 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb2Q91Y00 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb2Q91Y00 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb2Q91Y00 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb2Q91Y00 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb2Q91Y00 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.13■□□□□ 0.33
Pcdhb2Q91Y00 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb2Q91Y00 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Pcdhb2Q91Y00 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb2Q91Y00 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.13■□□□□ 0.33
Pcdhb2Q91Y00 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb2Q91Y00 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Pcdhb2Q91Y00 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Pcdhb2Q91Y00 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb2Q91Y00 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb2Q91Y00 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Pcdhb2Q91Y00 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC17.13■□□□□ 0.33
Pcdhb2Q91Y00 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb2Q91Y00 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb2Q91Y00 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.13■□□□□ 0.33
Pcdhb2Q91Y00 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb2Q91Y00 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb2Q91Y00 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb2Q91Y00 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb2Q91Y00 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb2Q91Y00 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb2Q91Y00 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb2Q91Y00 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb2Q91Y00 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms