Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb22Q91XZ8 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb22Q91XZ8 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb22Q91XZ8 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb22Q91XZ8 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb22Q91XZ8 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb22Q91XZ8 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb22Q91XZ8 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb22Q91XZ8 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb22Q91XZ8 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb22Q91XZ8 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Pcdhb22Q91XZ8 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb22Q91XZ8 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC18.87■□□□□ 0.61
Pcdhb22Q91XZ8 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb22Q91XZ8 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb22Q91XZ8 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb22Q91XZ8 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC18.86■□□□□ 0.61
Pcdhb22Q91XZ8 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb22Q91XZ8 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Pcdhb22Q91XZ8 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb22Q91XZ8 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb22Q91XZ8 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC18.86■□□□□ 0.61
Pcdhb22Q91XZ8 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb22Q91XZ8 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb22Q91XZ8 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb22Q91XZ8 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb22Q91XZ8 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Pcdhb22Q91XZ8 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC18.86■□□□□ 0.61
Pcdhb22Q91XZ8 AC124569.2-201ENSMUST00000225998 818 ntBASIC18.86■□□□□ 0.61
Pcdhb22Q91XZ8 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Pcdhb22Q91XZ8 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC18.86■□□□□ 0.61
Pcdhb22Q91XZ8 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC18.86■□□□□ 0.61
Pcdhb22Q91XZ8 Rbfox2-206ENSMUST00000227314 1810 ntBASIC18.86■□□□□ 0.61
Pcdhb22Q91XZ8 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb22Q91XZ8 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb22Q91XZ8 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb22Q91XZ8 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb22Q91XZ8 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb22Q91XZ8 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb22Q91XZ8 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb22Q91XZ8 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Pcdhb22Q91XZ8 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC18.85■□□□□ 0.61
Pcdhb22Q91XZ8 Gm15372-201ENSMUST00000120729 834 ntBASIC18.85■□□□□ 0.61
Pcdhb22Q91XZ8 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb22Q91XZ8 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC18.85■□□□□ 0.61
Pcdhb22Q91XZ8 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC18.85■□□□□ 0.61
Pcdhb22Q91XZ8 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC18.85■□□□□ 0.61
Pcdhb22Q91XZ8 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC18.85■□□□□ 0.61
Pcdhb22Q91XZ8 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Pcdhb22Q91XZ8 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb22Q91XZ8 Gm18669-201ENSMUST00000216049 778 ntBASIC18.85■□□□□ 0.61
Pcdhb22Q91XZ8 AC153889.1-201ENSMUST00000219257 330 ntBASIC18.85■□□□□ 0.61
Pcdhb22Q91XZ8 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb22Q91XZ8 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb22Q91XZ8 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb22Q91XZ8 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
Pcdhb22Q91XZ8 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb22Q91XZ8 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb22Q91XZ8 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb22Q91XZ8 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb22Q91XZ8 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb22Q91XZ8 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb22Q91XZ8 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb22Q91XZ8 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb22Q91XZ8 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb22Q91XZ8 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb22Q91XZ8 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC18.84■□□□□ 0.61
Pcdhb22Q91XZ8 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC18.84■□□□□ 0.61
Pcdhb22Q91XZ8 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC18.84■□□□□ 0.61
Pcdhb22Q91XZ8 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC18.84■□□□□ 0.61
Pcdhb22Q91XZ8 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC18.84■□□□□ 0.61
Pcdhb22Q91XZ8 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb22Q91XZ8 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb22Q91XZ8 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb22Q91XZ8 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb22Q91XZ8 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb22Q91XZ8 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdhb22Q91XZ8 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdhb22Q91XZ8 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdhb22Q91XZ8 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdhb22Q91XZ8 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdhb22Q91XZ8 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Pcdhb22Q91XZ8 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhb22Q91XZ8 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhb22Q91XZ8 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhb22Q91XZ8 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhb22Q91XZ8 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhb22Q91XZ8 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhb22Q91XZ8 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhb22Q91XZ8 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhb22Q91XZ8 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhb22Q91XZ8 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb22Q91XZ8 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Pcdhb22Q91XZ8 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb22Q91XZ8 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb22Q91XZ8 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb22Q91XZ8 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb22Q91XZ8 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb22Q91XZ8 Gm10459-201ENSMUST00000202708 1155 ntBASIC18.82■□□□□ 0.6
Pcdhb22Q91XZ8 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms