Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.07■□□□□ 0.16
Pcdhb4Q91XZ6 Gm44450-201ENSMUST00000199528 114 ntBASIC16.07■□□□□ 0.16
Pcdhb4Q91XZ6 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.07■□□□□ 0.16
Pcdhb4Q91XZ6 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb4Q91XZ6 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Pcdhb4Q91XZ6 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb4Q91XZ6 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.07■□□□□ 0.16
Pcdhb4Q91XZ6 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb4Q91XZ6 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb4Q91XZ6 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.07■□□□□ 0.16
Pcdhb4Q91XZ6 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb4Q91XZ6 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb4Q91XZ6 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb4Q91XZ6 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb4Q91XZ6 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb4Q91XZ6 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb4Q91XZ6 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb4Q91XZ6 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb4Q91XZ6 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb4Q91XZ6 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb4Q91XZ6 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb4Q91XZ6 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb4Q91XZ6 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Pcdhb4Q91XZ6 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb4Q91XZ6 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb4Q91XZ6 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb4Q91XZ6 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb4Q91XZ6 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.06■□□□□ 0.16
Pcdhb4Q91XZ6 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb4Q91XZ6 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.06■□□□□ 0.16
Pcdhb4Q91XZ6 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb4Q91XZ6 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb4Q91XZ6 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb4Q91XZ6 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.06■□□□□ 0.16
Pcdhb4Q91XZ6 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb4Q91XZ6 Gm43799-201ENSMUST00000201845 579 ntBASIC16.06■□□□□ 0.16
Pcdhb4Q91XZ6 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb4Q91XZ6 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb4Q91XZ6 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb4Q91XZ6 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Pcdhb4Q91XZ6 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb4Q91XZ6 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb4Q91XZ6 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
Pcdhb4Q91XZ6 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb4Q91XZ6 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Pcdhb4Q91XZ6 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb4Q91XZ6 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb4Q91XZ6 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb4Q91XZ6 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb4Q91XZ6 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Pcdhb4Q91XZ6 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb4Q91XZ6 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb4Q91XZ6 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb4Q91XZ6 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb4Q91XZ6 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb4Q91XZ6 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb4Q91XZ6 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb4Q91XZ6 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb4Q91XZ6 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb4Q91XZ6 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb4Q91XZ6 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
Pcdhb4Q91XZ6 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC16.05■□□□□ 0.16
Pcdhb4Q91XZ6 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.05■□□□□ 0.16
Pcdhb4Q91XZ6 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.05■□□□□ 0.16
Pcdhb4Q91XZ6 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.05■□□□□ 0.16
Pcdhb4Q91XZ6 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb4Q91XZ6 Mir5130-201ENSMUST00000175160 84 ntBASIC16.05■□□□□ 0.16
Pcdhb4Q91XZ6 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb4Q91XZ6 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.05■□□□□ 0.16
Pcdhb4Q91XZ6 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb4Q91XZ6 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Pcdhb4Q91XZ6 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb4Q91XZ6 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb4Q91XZ6 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb4Q91XZ6 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb4Q91XZ6 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Pcdhb4Q91XZ6 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb4Q91XZ6 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb4Q91XZ6 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb4Q91XZ6 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb4Q91XZ6 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb4Q91XZ6 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb4Q91XZ6 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC16.04■□□□□ 0.16
Pcdhb4Q91XZ6 Gm7889-201ENSMUST00000185591 958 ntBASIC16.04■□□□□ 0.16
Pcdhb4Q91XZ6 Gm10252-201ENSMUST00000209541 832 ntBASIC16.04■□□□□ 0.16
Pcdhb4Q91XZ6 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.04■□□□□ 0.16
Pcdhb4Q91XZ6 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb4Q91XZ6 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb4Q91XZ6 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb4Q91XZ6 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb4Q91XZ6 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Pcdhb4Q91XZ6 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb4Q91XZ6 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb4Q91XZ6 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb4Q91XZ6 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb4Q91XZ6 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb4Q91XZ6 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb4Q91XZ6 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb4Q91XZ6 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb4Q91XZ6 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms