Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb17Q91VD8 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb17Q91VD8 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.8■□□□□ 0.28
Pcdhb17Q91VD8 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb17Q91VD8 Gm26871-204ENSMUST00000181310 523 ntTSL 3 BASIC16.8■□□□□ 0.28
Pcdhb17Q91VD8 Gm20822-202ENSMUST00000188422 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb17Q91VD8 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb17Q91VD8 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC16.8■□□□□ 0.28
Pcdhb17Q91VD8 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.8■□□□□ 0.28
Pcdhb17Q91VD8 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb17Q91VD8 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb17Q91VD8 Gm5169-201ENSMUST00000096469 768 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb17Q91VD8 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb17Q91VD8 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb17Q91VD8 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb17Q91VD8 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb17Q91VD8 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Pcdhb17Q91VD8 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb17Q91VD8 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb17Q91VD8 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Pcdhb17Q91VD8 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb17Q91VD8 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb17Q91VD8 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb17Q91VD8 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb17Q91VD8 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb17Q91VD8 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb17Q91VD8 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Pcdhb17Q91VD8 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb17Q91VD8 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb17Q91VD8 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb17Q91VD8 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb17Q91VD8 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb17Q91VD8 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb17Q91VD8 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Pcdhb17Q91VD8 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb17Q91VD8 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb17Q91VD8 Olfr1397-ps1-201ENSMUST00000121388 962 ntBASIC16.79■□□□□ 0.28
Pcdhb17Q91VD8 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC16.79■□□□□ 0.28
Pcdhb17Q91VD8 Speer4f2-201ENSMUST00000166086 1278 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Pcdhb17Q91VD8 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC16.79■□□□□ 0.28
Pcdhb17Q91VD8 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.79■□□□□ 0.28
Pcdhb17Q91VD8 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC16.79■□□□□ 0.28
Pcdhb17Q91VD8 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC16.79■□□□□ 0.28
Pcdhb17Q91VD8 AC132881.2-201ENSMUST00000225474 709 ntBASIC16.79■□□□□ 0.28
Pcdhb17Q91VD8 Gm10819-201ENSMUST00000099988 561 ntBASIC16.79■□□□□ 0.28
Pcdhb17Q91VD8 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb17Q91VD8 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb17Q91VD8 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb17Q91VD8 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Pcdhb17Q91VD8 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb17Q91VD8 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Pcdhb17Q91VD8 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb17Q91VD8 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb17Q91VD8 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC16.78■□□□□ 0.28
Pcdhb17Q91VD8 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb17Q91VD8 AC153794.1-201ENSMUST00000169148 126 ntBASIC16.78■□□□□ 0.28
Pcdhb17Q91VD8 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb17Q91VD8 Mir3081-201ENSMUST00000175305 84 ntBASIC16.78■□□□□ 0.28
Pcdhb17Q91VD8 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb17Q91VD8 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb17Q91VD8 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC16.78■□□□□ 0.28
Pcdhb17Q91VD8 Gm17807-201ENSMUST00000186869 298 ntBASIC16.78■□□□□ 0.28
Pcdhb17Q91VD8 Gm28925-201ENSMUST00000188586 168 ntBASIC16.78■□□□□ 0.28
Pcdhb17Q91VD8 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb17Q91VD8 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC16.78■□□□□ 0.28
Pcdhb17Q91VD8 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb17Q91VD8 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb17Q91VD8 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb17Q91VD8 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Pcdhb17Q91VD8 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb17Q91VD8 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb17Q91VD8 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Pcdhb17Q91VD8 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb17Q91VD8 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Pcdhb17Q91VD8 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb17Q91VD8 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.77■□□□□ 0.28
Pcdhb17Q91VD8 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb17Q91VD8 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb17Q91VD8 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb17Q91VD8 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb17Q91VD8 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Pcdhb17Q91VD8 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Pcdhb17Q91VD8 Gm15074-201ENSMUST00000117603 936 ntBASIC16.77■□□□□ 0.28
Pcdhb17Q91VD8 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb17Q91VD8 Cnot2-201ENSMUST00000020374 1059 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb17Q91VD8 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb17Q91VD8 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb17Q91VD8 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Pcdhb17Q91VD8 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Pcdhb17Q91VD8 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhb17Q91VD8 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhb17Q91VD8 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.27
Pcdhb17Q91VD8 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhb17Q91VD8 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Pcdhb17Q91VD8 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhb17Q91VD8 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.76■□□□□ 0.27
Pcdhb17Q91VD8 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.76■□□□□ 0.27
Pcdhb17Q91VD8 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Pcdhb17Q91VD8 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb17Q91VD8 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms