Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Cspg4Q8VHY0 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.85□□□□□ -0.19
Cspg4Q8VHY0 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cspg4Q8VHY0 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cspg4Q8VHY0 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cspg4Q8VHY0 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cspg4Q8VHY0 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cspg4Q8VHY0 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cspg4Q8VHY0 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cspg4Q8VHY0 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cspg4Q8VHY0 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cspg4Q8VHY0 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC13.85□□□□□ -0.19
Cspg4Q8VHY0 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cspg4Q8VHY0 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cspg4Q8VHY0 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cspg4Q8VHY0 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cspg4Q8VHY0 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cspg4Q8VHY0 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cspg4Q8VHY0 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cspg4Q8VHY0 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC13.85□□□□□ -0.19
Cspg4Q8VHY0 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cspg4Q8VHY0 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cspg4Q8VHY0 Dmtn-207ENSMUST00000228001 2437 ntBASIC13.84□□□□□ -0.19
Cspg4Q8VHY0 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cspg4Q8VHY0 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cspg4Q8VHY0 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cspg4Q8VHY0 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cspg4Q8VHY0 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC13.84□□□□□ -0.19
Cspg4Q8VHY0 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cspg4Q8VHY0 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC13.84□□□□□ -0.19
Cspg4Q8VHY0 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cspg4Q8VHY0 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Cspg4Q8VHY0 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cspg4Q8VHY0 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cspg4Q8VHY0 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cspg4Q8VHY0 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cspg4Q8VHY0 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cspg4Q8VHY0 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Cspg4Q8VHY0 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC13.84□□□□□ -0.19
Cspg4Q8VHY0 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cspg4Q8VHY0 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Cspg4Q8VHY0 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Cspg4Q8VHY0 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cspg4Q8VHY0 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC13.83□□□□□ -0.19
Cspg4Q8VHY0 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cspg4Q8VHY0 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cspg4Q8VHY0 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cspg4Q8VHY0 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cspg4Q8VHY0 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cspg4Q8VHY0 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC13.83□□□□□ -0.2
Cspg4Q8VHY0 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC13.83□□□□□ -0.2
Cspg4Q8VHY0 Gm17271-201ENSMUST00000165535 355 ntBASIC13.83□□□□□ -0.2
Cspg4Q8VHY0 Gm5253-201ENSMUST00000187104 1025 ntBASIC13.83□□□□□ -0.2
Cspg4Q8VHY0 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC13.83□□□□□ -0.2
Cspg4Q8VHY0 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC13.83□□□□□ -0.2
Cspg4Q8VHY0 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cspg4Q8VHY0 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cspg4Q8VHY0 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cspg4Q8VHY0 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cspg4Q8VHY0 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cspg4Q8VHY0 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cspg4Q8VHY0 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cspg4Q8VHY0 Gm5828-201ENSMUST00000071842 1860 ntBASIC13.83□□□□□ -0.2
Cspg4Q8VHY0 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Cspg4Q8VHY0 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cspg4Q8VHY0 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
Cspg4Q8VHY0 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cspg4Q8VHY0 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cspg4Q8VHY0 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cspg4Q8VHY0 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
Cspg4Q8VHY0 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cspg4Q8VHY0 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Cspg4Q8VHY0 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cspg4Q8VHY0 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cspg4Q8VHY0 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cspg4Q8VHY0 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Cspg4Q8VHY0 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Cspg4Q8VHY0 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cspg4Q8VHY0 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC13.82□□□□□ -0.2
Cspg4Q8VHY0 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cspg4Q8VHY0 Mir1895-201ENSMUST00000122615 79 ntBASIC13.82□□□□□ -0.2
Cspg4Q8VHY0 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cspg4Q8VHY0 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC13.82□□□□□ -0.2
Cspg4Q8VHY0 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cspg4Q8VHY0 Gm2423-201ENSMUST00000074863 733 ntBASIC13.82□□□□□ -0.2
Cspg4Q8VHY0 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cspg4Q8VHY0 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cspg4Q8VHY0 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cspg4Q8VHY0 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cspg4Q8VHY0 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cspg4Q8VHY0 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cspg4Q8VHY0 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cspg4Q8VHY0 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cspg4Q8VHY0 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cspg4Q8VHY0 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cspg4Q8VHY0 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cspg4Q8VHY0 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC13.81□□□□□ -0.2
Cspg4Q8VHY0 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC13.81□□□□□ -0.2
Cspg4Q8VHY0 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cspg4Q8VHY0 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms