Protein–RNA interactions for Protein: Q8R429

Atp2a1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp2a1Q8R429 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Atp2a1Q8R429 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC18.04■□□□□ 0.48
Atp2a1Q8R429 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Atp2a1Q8R429 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Atp2a1Q8R429 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Atp2a1Q8R429 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
Atp2a1Q8R429 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
Atp2a1Q8R429 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Atp2a1Q8R429 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Atp2a1Q8R429 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Atp2a1Q8R429 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Atp2a1Q8R429 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Atp2a1Q8R429 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Atp2a1Q8R429 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Atp2a1Q8R429 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Atp2a1Q8R429 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC18.03■□□□□ 0.48
Atp2a1Q8R429 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Atp2a1Q8R429 Gm2651-201ENSMUST00000203560 838 ntBASIC18.03■□□□□ 0.48
Atp2a1Q8R429 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Atp2a1Q8R429 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Atp2a1Q8R429 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Atp2a1Q8R429 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Atp2a1Q8R429 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Atp2a1Q8R429 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Atp2a1Q8R429 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Atp2a1Q8R429 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC18.03■□□□□ 0.48
Atp2a1Q8R429 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Atp2a1Q8R429 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Atp2a1Q8R429 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Atp2a1Q8R429 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Atp2a1Q8R429 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Atp2a1Q8R429 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Atp2a1Q8R429 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Atp2a1Q8R429 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Atp2a1Q8R429 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Atp2a1Q8R429 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
Atp2a1Q8R429 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC18.02■□□□□ 0.48
Atp2a1Q8R429 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Atp2a1Q8R429 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC18.02■□□□□ 0.48
Atp2a1Q8R429 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Atp2a1Q8R429 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Atp2a1Q8R429 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC18.02■□□□□ 0.48
Atp2a1Q8R429 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Atp2a1Q8R429 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Atp2a1Q8R429 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Atp2a1Q8R429 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC18.02■□□□□ 0.47
Atp2a1Q8R429 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Atp2a1Q8R429 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Atp2a1Q8R429 Haglr-201ENSMUST00000100000 2085 ntBASIC18.02■□□□□ 0.47
Atp2a1Q8R429 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Atp2a1Q8R429 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atp2a1Q8R429 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atp2a1Q8R429 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atp2a1Q8R429 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atp2a1Q8R429 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atp2a1Q8R429 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atp2a1Q8R429 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
Atp2a1Q8R429 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atp2a1Q8R429 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Atp2a1Q8R429 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Atp2a1Q8R429 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Atp2a1Q8R429 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Atp2a1Q8R429 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atp2a1Q8R429 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atp2a1Q8R429 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atp2a1Q8R429 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atp2a1Q8R429 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Atp2a1Q8R429 Gm18856-201ENSMUST00000178096 1374 ntBASIC18.01■□□□□ 0.47
Atp2a1Q8R429 Gm26596-201ENSMUST00000180464 2655 ntBASIC18.01■□□□□ 0.47
Atp2a1Q8R429 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC18■□□□□ 0.47
Atp2a1Q8R429 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC18■□□□□ 0.47
Atp2a1Q8R429 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
Atp2a1Q8R429 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Atp2a1Q8R429 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Atp2a1Q8R429 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Atp2a1Q8R429 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC18■□□□□ 0.47
Atp2a1Q8R429 Gm8349-201ENSMUST00000182720 1003 ntBASIC18■□□□□ 0.47
Atp2a1Q8R429 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Atp2a1Q8R429 Gm8839-201ENSMUST00000121279 1645 ntBASIC18■□□□□ 0.47
Atp2a1Q8R429 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Atp2a1Q8R429 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC18■□□□□ 0.47
Atp2a1Q8R429 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Atp2a1Q8R429 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Atp2a1Q8R429 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Atp2a1Q8R429 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Atp2a1Q8R429 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Atp2a1Q8R429 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Atp2a1Q8R429 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.99■□□□□ 0.47
Atp2a1Q8R429 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.99■□□□□ 0.47
Atp2a1Q8R429 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Atp2a1Q8R429 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Atp2a1Q8R429 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Atp2a1Q8R429 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Atp2a1Q8R429 Gm10060-201ENSMUST00000212002 111 ntBASIC17.99■□□□□ 0.47
Atp2a1Q8R429 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Atp2a1Q8R429 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC17.99■□□□□ 0.47
Atp2a1Q8R429 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Atp2a1Q8R429 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.99■□□□□ 0.47
Atp2a1Q8R429 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Atp2a1Q8R429 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms