Protein–RNA interactions for Protein: Q8R3Z5

Cacnb1, Voltage-dependent L-type calcium channel subunit beta-1, mousemouse

Predictions only

Length 597 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb1Q8R3Z5 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Cacnb1Q8R3Z5 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Cacnb1Q8R3Z5 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cacnb1Q8R3Z5 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cacnb1Q8R3Z5 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cacnb1Q8R3Z5 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Cacnb1Q8R3Z5 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cacnb1Q8R3Z5 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cacnb1Q8R3Z5 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
Cacnb1Q8R3Z5 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cacnb1Q8R3Z5 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cacnb1Q8R3Z5 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cacnb1Q8R3Z5 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cacnb1Q8R3Z5 Aebp2-205ENSMUST00000160836 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cacnb1Q8R3Z5 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Cacnb1Q8R3Z5 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cacnb1Q8R3Z5 Gm11077-201ENSMUST00000111844 84 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Cacnb1Q8R3Z5 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC18.31■□□□□ 0.52
Cacnb1Q8R3Z5 Gm12088-201ENSMUST00000137364 520 ntTSL 2 BASIC18.31■□□□□ 0.52
Cacnb1Q8R3Z5 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cacnb1Q8R3Z5 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cacnb1Q8R3Z5 Gm26907-201ENSMUST00000181794 729 ntTSL 5 BASIC18.31■□□□□ 0.52
Cacnb1Q8R3Z5 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cacnb1Q8R3Z5 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cacnb1Q8R3Z5 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Cacnb1Q8R3Z5 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cacnb1Q8R3Z5 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Cacnb1Q8R3Z5 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cacnb1Q8R3Z5 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC18.31■□□□□ 0.52
Cacnb1Q8R3Z5 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cacnb1Q8R3Z5 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cacnb1Q8R3Z5 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Cacnb1Q8R3Z5 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cacnb1Q8R3Z5 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cacnb1Q8R3Z5 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cacnb1Q8R3Z5 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cacnb1Q8R3Z5 Gm11672-201ENSMUST00000140380 645 ntTSL 5 BASIC18.3■□□□□ 0.52
Cacnb1Q8R3Z5 Gm7714-201ENSMUST00000169154 685 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cacnb1Q8R3Z5 Gm6659-201ENSMUST00000174752 547 ntBASIC18.3■□□□□ 0.52
Cacnb1Q8R3Z5 Gm18595-201ENSMUST00000175736 1068 ntBASIC18.3■□□□□ 0.52
Cacnb1Q8R3Z5 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Cacnb1Q8R3Z5 Gm37576-201ENSMUST00000194228 372 ntBASIC18.3■□□□□ 0.52
Cacnb1Q8R3Z5 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cacnb1Q8R3Z5 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cacnb1Q8R3Z5 Gm18421-201ENSMUST00000204122 625 ntBASIC18.3■□□□□ 0.52
Cacnb1Q8R3Z5 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC18.3■□□□□ 0.52
Cacnb1Q8R3Z5 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cacnb1Q8R3Z5 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cacnb1Q8R3Z5 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cacnb1Q8R3Z5 Tas2r113-201ENSMUST00000079035 930 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Cacnb1Q8R3Z5 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cacnb1Q8R3Z5 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cacnb1Q8R3Z5 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cacnb1Q8R3Z5 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.3■□□□□ 0.52
Cacnb1Q8R3Z5 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cacnb1Q8R3Z5 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cacnb1Q8R3Z5 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cacnb1Q8R3Z5 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cacnb1Q8R3Z5 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC18.3■□□□□ 0.52
Cacnb1Q8R3Z5 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cacnb1Q8R3Z5 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cacnb1Q8R3Z5 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cacnb1Q8R3Z5 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cacnb1Q8R3Z5 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cacnb1Q8R3Z5 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cacnb1Q8R3Z5 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cacnb1Q8R3Z5 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cacnb1Q8R3Z5 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cacnb1Q8R3Z5 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC18.29■□□□□ 0.52
Cacnb1Q8R3Z5 Gm23634-201ENSMUST00000175071 91 ntBASIC18.29■□□□□ 0.52
Cacnb1Q8R3Z5 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cacnb1Q8R3Z5 Cox20-201ENSMUST00000027781 471 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cacnb1Q8R3Z5 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cacnb1Q8R3Z5 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cacnb1Q8R3Z5 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cacnb1Q8R3Z5 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cacnb1Q8R3Z5 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cacnb1Q8R3Z5 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cacnb1Q8R3Z5 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cacnb1Q8R3Z5 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Cacnb1Q8R3Z5 Zfp264-201ENSMUST00000208656 1563 ntBASIC18.29■□□□□ 0.52
Cacnb1Q8R3Z5 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Cacnb1Q8R3Z5 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cacnb1Q8R3Z5 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Cacnb1Q8R3Z5 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cacnb1Q8R3Z5 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cacnb1Q8R3Z5 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cacnb1Q8R3Z5 Hivep3-201ENSMUST00000084306 2973 ntBASIC18.28■□□□□ 0.52
Cacnb1Q8R3Z5 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cacnb1Q8R3Z5 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Cacnb1Q8R3Z5 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cacnb1Q8R3Z5 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cacnb1Q8R3Z5 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cacnb1Q8R3Z5 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cacnb1Q8R3Z5 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cacnb1Q8R3Z5 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cacnb1Q8R3Z5 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cacnb1Q8R3Z5 Gm8922-201ENSMUST00000170057 1167 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Cacnb1Q8R3Z5 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cacnb1Q8R3Z5 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms