Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nudcd3Q8R1N4 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nudcd3Q8R1N4 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nudcd3Q8R1N4 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nudcd3Q8R1N4 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.2■□□□□ 0.18
Nudcd3Q8R1N4 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nudcd3Q8R1N4 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nudcd3Q8R1N4 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.2■□□□□ 0.18
Nudcd3Q8R1N4 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nudcd3Q8R1N4 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nudcd3Q8R1N4 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nudcd3Q8R1N4 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Nudcd3Q8R1N4 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nudcd3Q8R1N4 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Nudcd3Q8R1N4 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nudcd3Q8R1N4 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nudcd3Q8R1N4 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.19■□□□□ 0.18
Nudcd3Q8R1N4 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nudcd3Q8R1N4 Gm10698-201ENSMUST00000182663 604 ntBASIC16.19■□□□□ 0.18
Nudcd3Q8R1N4 Gm7791-201ENSMUST00000219066 539 ntBASIC16.19■□□□□ 0.18
Nudcd3Q8R1N4 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nudcd3Q8R1N4 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nudcd3Q8R1N4 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Nudcd3Q8R1N4 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nudcd3Q8R1N4 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nudcd3Q8R1N4 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nudcd3Q8R1N4 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nudcd3Q8R1N4 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nudcd3Q8R1N4 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC16.19■□□□□ 0.18
Nudcd3Q8R1N4 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Nudcd3Q8R1N4 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nudcd3Q8R1N4 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nudcd3Q8R1N4 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nudcd3Q8R1N4 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nudcd3Q8R1N4 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nudcd3Q8R1N4 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nudcd3Q8R1N4 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nudcd3Q8R1N4 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
Nudcd3Q8R1N4 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Nudcd3Q8R1N4 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.18■□□□□ 0.18
Nudcd3Q8R1N4 Gm44878-201ENSMUST00000205812 1295 ntBASIC16.18■□□□□ 0.18
Nudcd3Q8R1N4 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Nudcd3Q8R1N4 AC164629.5-201ENSMUST00000220387 632 ntBASIC16.18■□□□□ 0.18
Nudcd3Q8R1N4 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nudcd3Q8R1N4 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nudcd3Q8R1N4 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nudcd3Q8R1N4 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nudcd3Q8R1N4 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nudcd3Q8R1N4 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nudcd3Q8R1N4 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nudcd3Q8R1N4 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Nudcd3Q8R1N4 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nudcd3Q8R1N4 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.17■□□□□ 0.18
Nudcd3Q8R1N4 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nudcd3Q8R1N4 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.17■□□□□ 0.18
Nudcd3Q8R1N4 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Nudcd3Q8R1N4 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC16.17■□□□□ 0.18
Nudcd3Q8R1N4 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nudcd3Q8R1N4 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nudcd3Q8R1N4 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Nudcd3Q8R1N4 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Nudcd3Q8R1N4 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nudcd3Q8R1N4 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nudcd3Q8R1N4 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nudcd3Q8R1N4 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Nudcd3Q8R1N4 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nudcd3Q8R1N4 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
Nudcd3Q8R1N4 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Nudcd3Q8R1N4 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nudcd3Q8R1N4 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Nudcd3Q8R1N4 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Nudcd3Q8R1N4 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nudcd3Q8R1N4 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nudcd3Q8R1N4 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nudcd3Q8R1N4 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nudcd3Q8R1N4 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.16■□□□□ 0.18
Nudcd3Q8R1N4 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Nudcd3Q8R1N4 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nudcd3Q8R1N4 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nudcd3Q8R1N4 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.16■□□□□ 0.18
Nudcd3Q8R1N4 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nudcd3Q8R1N4 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.16■□□□□ 0.18
Nudcd3Q8R1N4 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.16■□□□□ 0.18
Nudcd3Q8R1N4 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nudcd3Q8R1N4 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Nudcd3Q8R1N4 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nudcd3Q8R1N4 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nudcd3Q8R1N4 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nudcd3Q8R1N4 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nudcd3Q8R1N4 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nudcd3Q8R1N4 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nudcd3Q8R1N4 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nudcd3Q8R1N4 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nudcd3Q8R1N4 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nudcd3Q8R1N4 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Nudcd3Q8R1N4 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nudcd3Q8R1N4 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nudcd3Q8R1N4 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nudcd3Q8R1N4 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nudcd3Q8R1N4 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms