Protein–RNA interactions for Protein: Q8R1C3

Vopp1, Vesicular, overexpressed in cancer, prosurvival protein 1, mousemouse

Predictions only

Length 172 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vopp1Q8R1C3 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vopp1Q8R1C3 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vopp1Q8R1C3 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vopp1Q8R1C3 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vopp1Q8R1C3 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Vopp1Q8R1C3 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Vopp1Q8R1C3 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vopp1Q8R1C3 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vopp1Q8R1C3 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Vopp1Q8R1C3 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Vopp1Q8R1C3 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vopp1Q8R1C3 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vopp1Q8R1C3 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vopp1Q8R1C3 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Vopp1Q8R1C3 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vopp1Q8R1C3 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC17.07■□□□□ 0.32
Vopp1Q8R1C3 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC17.07■□□□□ 0.32
Vopp1Q8R1C3 Gm6257-201ENSMUST00000163864 910 ntBASIC17.07■□□□□ 0.32
Vopp1Q8R1C3 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Vopp1Q8R1C3 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vopp1Q8R1C3 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vopp1Q8R1C3 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Vopp1Q8R1C3 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Vopp1Q8R1C3 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vopp1Q8R1C3 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vopp1Q8R1C3 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vopp1Q8R1C3 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vopp1Q8R1C3 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vopp1Q8R1C3 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Vopp1Q8R1C3 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Vopp1Q8R1C3 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC17.06■□□□□ 0.32
Vopp1Q8R1C3 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vopp1Q8R1C3 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vopp1Q8R1C3 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Vopp1Q8R1C3 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC17.06■□□□□ 0.32
Vopp1Q8R1C3 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Vopp1Q8R1C3 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vopp1Q8R1C3 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC17.06■□□□□ 0.32
Vopp1Q8R1C3 CT943659.1-201ENSMUST00000215459 326 ntBASIC17.06■□□□□ 0.32
Vopp1Q8R1C3 AC090659.1-201ENSMUST00000224334 768 ntBASIC17.06■□□□□ 0.32
Vopp1Q8R1C3 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.06■□□□□ 0.32
Vopp1Q8R1C3 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Vopp1Q8R1C3 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC17.06■□□□□ 0.32
Vopp1Q8R1C3 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Vopp1Q8R1C3 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vopp1Q8R1C3 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Vopp1Q8R1C3 Gm11873-201ENSMUST00000117877 1304 ntBASIC17.05■□□□□ 0.32
Vopp1Q8R1C3 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Vopp1Q8R1C3 Gm13597-201ENSMUST00000121239 375 ntBASIC17.05■□□□□ 0.32
Vopp1Q8R1C3 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC17.05■□□□□ 0.32
Vopp1Q8R1C3 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vopp1Q8R1C3 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Vopp1Q8R1C3 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Vopp1Q8R1C3 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vopp1Q8R1C3 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC17.05■□□□□ 0.32
Vopp1Q8R1C3 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vopp1Q8R1C3 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vopp1Q8R1C3 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vopp1Q8R1C3 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vopp1Q8R1C3 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Vopp1Q8R1C3 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Vopp1Q8R1C3 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Vopp1Q8R1C3 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vopp1Q8R1C3 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
Vopp1Q8R1C3 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vopp1Q8R1C3 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vopp1Q8R1C3 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vopp1Q8R1C3 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vopp1Q8R1C3 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vopp1Q8R1C3 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vopp1Q8R1C3 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vopp1Q8R1C3 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC17.04■□□□□ 0.32
Vopp1Q8R1C3 Gm8344-201ENSMUST00000119813 856 ntBASIC17.04■□□□□ 0.32
Vopp1Q8R1C3 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Vopp1Q8R1C3 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC17.04■□□□□ 0.32
Vopp1Q8R1C3 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vopp1Q8R1C3 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vopp1Q8R1C3 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vopp1Q8R1C3 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vopp1Q8R1C3 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vopp1Q8R1C3 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Vopp1Q8R1C3 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Vopp1Q8R1C3 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vopp1Q8R1C3 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vopp1Q8R1C3 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vopp1Q8R1C3 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vopp1Q8R1C3 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Vopp1Q8R1C3 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Vopp1Q8R1C3 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vopp1Q8R1C3 Gm23935-201ENSMUST00000102303 57 ntBASIC17.03■□□□□ 0.32
Vopp1Q8R1C3 Gm24270-201ENSMUST00000102326 57 ntBASIC17.03■□□□□ 0.32
Vopp1Q8R1C3 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC17.03■□□□□ 0.32
Vopp1Q8R1C3 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC17.03■□□□□ 0.32
Vopp1Q8R1C3 Gm24245-201ENSMUST00000157318 57 ntBASIC17.03■□□□□ 0.32
Vopp1Q8R1C3 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Vopp1Q8R1C3 Gm37153-201ENSMUST00000193637 231 ntBASIC17.03■□□□□ 0.32
Vopp1Q8R1C3 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Vopp1Q8R1C3 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Vopp1Q8R1C3 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC17.03■□□□□ 0.32
Vopp1Q8R1C3 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms