Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ddx54Q8K4L0 Gm5828-201ENSMUST00000071842 1860 ntBASIC21.11■□□□□ 0.97
Ddx54Q8K4L0 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
Ddx54Q8K4L0 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Ddx54Q8K4L0 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC21.11■□□□□ 0.97
Ddx54Q8K4L0 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ddx54Q8K4L0 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ddx54Q8K4L0 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ddx54Q8K4L0 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Ddx54Q8K4L0 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Ddx54Q8K4L0 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ddx54Q8K4L0 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ddx54Q8K4L0 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
Ddx54Q8K4L0 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ddx54Q8K4L0 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC21.11■□□□□ 0.97
Ddx54Q8K4L0 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Ddx54Q8K4L0 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Ddx54Q8K4L0 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ddx54Q8K4L0 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Ddx54Q8K4L0 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ddx54Q8K4L0 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC21.1■□□□□ 0.97
Ddx54Q8K4L0 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ddx54Q8K4L0 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC21.1■□□□□ 0.97
Ddx54Q8K4L0 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ddx54Q8K4L0 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC21.1■□□□□ 0.97
Ddx54Q8K4L0 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC21.1■□□□□ 0.97
Ddx54Q8K4L0 Gm27301-201ENSMUST00000184012 127 ntBASIC21.1■□□□□ 0.97
Ddx54Q8K4L0 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC21.1■□□□□ 0.97
Ddx54Q8K4L0 AC107711.5-202ENSMUST00000226429 702 ntBASIC21.1■□□□□ 0.97
Ddx54Q8K4L0 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ddx54Q8K4L0 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ddx54Q8K4L0 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ddx54Q8K4L0 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ddx54Q8K4L0 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
Ddx54Q8K4L0 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ddx54Q8K4L0 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ddx54Q8K4L0 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC21.09■□□□□ 0.97
Ddx54Q8K4L0 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ddx54Q8K4L0 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC21.09■□□□□ 0.97
Ddx54Q8K4L0 Gm5177-201ENSMUST00000183092 997 ntBASIC21.09■□□□□ 0.97
Ddx54Q8K4L0 Gm27622-201ENSMUST00000183779 60 ntBASIC21.09■□□□□ 0.97
Ddx54Q8K4L0 AC093926.2-201ENSMUST00000214468 1228 ntBASIC21.09■□□□□ 0.97
Ddx54Q8K4L0 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC21.09■□□□□ 0.97
Ddx54Q8K4L0 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ddx54Q8K4L0 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Ddx54Q8K4L0 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ddx54Q8K4L0 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ddx54Q8K4L0 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Ddx54Q8K4L0 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ddx54Q8K4L0 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ddx54Q8K4L0 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ddx54Q8K4L0 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ddx54Q8K4L0 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC21.08■□□□□ 0.97
Ddx54Q8K4L0 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ddx54Q8K4L0 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Ddx54Q8K4L0 Gm9682-201ENSMUST00000197505 556 ntBASIC21.08■□□□□ 0.97
Ddx54Q8K4L0 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Ddx54Q8K4L0 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Ddx54Q8K4L0 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ddx54Q8K4L0 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
Ddx54Q8K4L0 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ddx54Q8K4L0 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Ddx54Q8K4L0 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ddx54Q8K4L0 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Ddx54Q8K4L0 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ddx54Q8K4L0 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC21.07■□□□□ 0.96
Ddx54Q8K4L0 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
Ddx54Q8K4L0 Mir449b-201ENSMUST00000104833 80 ntBASIC21.07■□□□□ 0.96
Ddx54Q8K4L0 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ddx54Q8K4L0 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC21.07■□□□□ 0.96
Ddx54Q8K4L0 Gm18889-201ENSMUST00000174284 929 ntBASIC21.07■□□□□ 0.96
Ddx54Q8K4L0 Gm43125-201ENSMUST00000201724 730 ntBASIC21.07■□□□□ 0.96
Ddx54Q8K4L0 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC21.07■□□□□ 0.96
Ddx54Q8K4L0 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ddx54Q8K4L0 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ddx54Q8K4L0 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ddx54Q8K4L0 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ddx54Q8K4L0 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ddx54Q8K4L0 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ddx54Q8K4L0 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC21.06■□□□□ 0.96
Ddx54Q8K4L0 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC21.06■□□□□ 0.96
Ddx54Q8K4L0 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC21.06■□□□□ 0.96
Ddx54Q8K4L0 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ddx54Q8K4L0 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC21.06■□□□□ 0.96
Ddx54Q8K4L0 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ddx54Q8K4L0 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Ddx54Q8K4L0 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ddx54Q8K4L0 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Ddx54Q8K4L0 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ddx54Q8K4L0 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC21.06■□□□□ 0.96
Ddx54Q8K4L0 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ddx54Q8K4L0 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ddx54Q8K4L0 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ddx54Q8K4L0 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ddx54Q8K4L0 Gm10461-201ENSMUST00000202073 4786 ntBASIC21.06■□□□□ 0.96
Ddx54Q8K4L0 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ddx54Q8K4L0 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Ddx54Q8K4L0 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ddx54Q8K4L0 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ddx54Q8K4L0 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms