Protein–RNA interactions for Protein: Q8K4E0

Alms1, Alstrom syndrome protein 1 homolog, mousemouse

Predictions only

Length 3,251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alms1Q8K4E0 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Alms1Q8K4E0 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Alms1Q8K4E0 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC15.77■□□□□ 0.12
Alms1Q8K4E0 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Alms1Q8K4E0 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Alms1Q8K4E0 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
Alms1Q8K4E0 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Alms1Q8K4E0 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC15.77■□□□□ 0.12
Alms1Q8K4E0 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Alms1Q8K4E0 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Alms1Q8K4E0 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Alms1Q8K4E0 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC15.77■□□□□ 0.11
Alms1Q8K4E0 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Alms1Q8K4E0 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
Alms1Q8K4E0 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC15.77■□□□□ 0.11
Alms1Q8K4E0 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Alms1Q8K4E0 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC15.77■□□□□ 0.11
Alms1Q8K4E0 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Alms1Q8K4E0 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Alms1Q8K4E0 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Alms1Q8K4E0 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Alms1Q8K4E0 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Alms1Q8K4E0 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Alms1Q8K4E0 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Alms1Q8K4E0 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Alms1Q8K4E0 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC15.76■□□□□ 0.11
Alms1Q8K4E0 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Alms1Q8K4E0 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Alms1Q8K4E0 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Alms1Q8K4E0 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Alms1Q8K4E0 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Alms1Q8K4E0 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Alms1Q8K4E0 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Alms1Q8K4E0 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Alms1Q8K4E0 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Alms1Q8K4E0 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Alms1Q8K4E0 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC15.76■□□□□ 0.11
Alms1Q8K4E0 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Alms1Q8K4E0 Mir3113-201ENSMUST00000175478 76 ntBASIC15.76■□□□□ 0.11
Alms1Q8K4E0 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC15.76■□□□□ 0.11
Alms1Q8K4E0 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Alms1Q8K4E0 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Alms1Q8K4E0 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Alms1Q8K4E0 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Alms1Q8K4E0 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Alms1Q8K4E0 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Alms1Q8K4E0 Gm7507-201ENSMUST00000183053 1008 ntBASIC15.76■□□□□ 0.11
Alms1Q8K4E0 Gm45683-201ENSMUST00000210825 1247 ntBASIC15.76■□□□□ 0.11
Alms1Q8K4E0 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Alms1Q8K4E0 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Alms1Q8K4E0 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Alms1Q8K4E0 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Alms1Q8K4E0 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Alms1Q8K4E0 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Alms1Q8K4E0 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Alms1Q8K4E0 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Alms1Q8K4E0 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC15.75■□□□□ 0.11
Alms1Q8K4E0 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Alms1Q8K4E0 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Alms1Q8K4E0 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Alms1Q8K4E0 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Alms1Q8K4E0 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Alms1Q8K4E0 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Alms1Q8K4E0 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC15.75■□□□□ 0.11
Alms1Q8K4E0 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Alms1Q8K4E0 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Alms1Q8K4E0 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Alms1Q8K4E0 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Alms1Q8K4E0 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Alms1Q8K4E0 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Alms1Q8K4E0 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Alms1Q8K4E0 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
Alms1Q8K4E0 Gm14701-201ENSMUST00000117156 348 ntBASIC15.74■□□□□ 0.11
Alms1Q8K4E0 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC15.74■□□□□ 0.11
Alms1Q8K4E0 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Alms1Q8K4E0 Gm15500-202ENSMUST00000071641 1019 ntBASIC15.74■□□□□ 0.11
Alms1Q8K4E0 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Alms1Q8K4E0 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Alms1Q8K4E0 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Alms1Q8K4E0 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Alms1Q8K4E0 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Alms1Q8K4E0 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Alms1Q8K4E0 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Alms1Q8K4E0 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Alms1Q8K4E0 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Alms1Q8K4E0 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
Alms1Q8K4E0 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Alms1Q8K4E0 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Alms1Q8K4E0 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Alms1Q8K4E0 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Alms1Q8K4E0 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Alms1Q8K4E0 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Alms1Q8K4E0 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Alms1Q8K4E0 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Alms1Q8K4E0 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Alms1Q8K4E0 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
Alms1Q8K4E0 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC15.74■□□□□ 0.11
Alms1Q8K4E0 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Alms1Q8K4E0 Gm5837-201ENSMUST00000191844 1369 ntBASIC15.74■□□□□ 0.11
Alms1Q8K4E0 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms