Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cchcr1Q8K2I2 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cchcr1Q8K2I2 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC19.14■□□□□ 0.65
Cchcr1Q8K2I2 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cchcr1Q8K2I2 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Cchcr1Q8K2I2 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cchcr1Q8K2I2 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Cchcr1Q8K2I2 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cchcr1Q8K2I2 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC19.14■□□□□ 0.65
Cchcr1Q8K2I2 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cchcr1Q8K2I2 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cchcr1Q8K2I2 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Cchcr1Q8K2I2 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cchcr1Q8K2I2 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Cchcr1Q8K2I2 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cchcr1Q8K2I2 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cchcr1Q8K2I2 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cchcr1Q8K2I2 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cchcr1Q8K2I2 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC19.13■□□□□ 0.65
Cchcr1Q8K2I2 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC19.13■□□□□ 0.65
Cchcr1Q8K2I2 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cchcr1Q8K2I2 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC19.13■□□□□ 0.65
Cchcr1Q8K2I2 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
Cchcr1Q8K2I2 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cchcr1Q8K2I2 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cchcr1Q8K2I2 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC19.13■□□□□ 0.65
Cchcr1Q8K2I2 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cchcr1Q8K2I2 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cchcr1Q8K2I2 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cchcr1Q8K2I2 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cchcr1Q8K2I2 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cchcr1Q8K2I2 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cchcr1Q8K2I2 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cchcr1Q8K2I2 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cchcr1Q8K2I2 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cchcr1Q8K2I2 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC19.12■□□□□ 0.65
Cchcr1Q8K2I2 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cchcr1Q8K2I2 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cchcr1Q8K2I2 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cchcr1Q8K2I2 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cchcr1Q8K2I2 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC19.12■□□□□ 0.65
Cchcr1Q8K2I2 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC19.12■□□□□ 0.65
Cchcr1Q8K2I2 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cchcr1Q8K2I2 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC19.12■□□□□ 0.65
Cchcr1Q8K2I2 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC19.12■□□□□ 0.65
Cchcr1Q8K2I2 Gm21559-201ENSMUST00000220638 855 ntBASIC19.12■□□□□ 0.65
Cchcr1Q8K2I2 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC19.12■□□□□ 0.65
Cchcr1Q8K2I2 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cchcr1Q8K2I2 Gm8587-201ENSMUST00000076538 843 ntBASIC19.12■□□□□ 0.65
Cchcr1Q8K2I2 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cchcr1Q8K2I2 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cchcr1Q8K2I2 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Cchcr1Q8K2I2 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cchcr1Q8K2I2 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cchcr1Q8K2I2 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cchcr1Q8K2I2 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cchcr1Q8K2I2 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC19.11■□□□□ 0.65
Cchcr1Q8K2I2 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Cchcr1Q8K2I2 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cchcr1Q8K2I2 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cchcr1Q8K2I2 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cchcr1Q8K2I2 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cchcr1Q8K2I2 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cchcr1Q8K2I2 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cchcr1Q8K2I2 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
Cchcr1Q8K2I2 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cchcr1Q8K2I2 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cchcr1Q8K2I2 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cchcr1Q8K2I2 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cchcr1Q8K2I2 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cchcr1Q8K2I2 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cchcr1Q8K2I2 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cchcr1Q8K2I2 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Cchcr1Q8K2I2 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Cchcr1Q8K2I2 Gm37722-201ENSMUST00000193757 208 ntBASIC19.1■□□□□ 0.65
Cchcr1Q8K2I2 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cchcr1Q8K2I2 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC19.1■□□□□ 0.65
Cchcr1Q8K2I2 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC19.1■□□□□ 0.65
Cchcr1Q8K2I2 Ntrk2-205ENSMUST00000224402 2284 ntBASIC19.1■□□□□ 0.65
Cchcr1Q8K2I2 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cchcr1Q8K2I2 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cchcr1Q8K2I2 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cchcr1Q8K2I2 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cchcr1Q8K2I2 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cchcr1Q8K2I2 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cchcr1Q8K2I2 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cchcr1Q8K2I2 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cchcr1Q8K2I2 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cchcr1Q8K2I2 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Cchcr1Q8K2I2 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cchcr1Q8K2I2 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cchcr1Q8K2I2 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cchcr1Q8K2I2 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cchcr1Q8K2I2 Rbfox2-206ENSMUST00000227314 1810 ntBASIC19.09■□□□□ 0.65
Cchcr1Q8K2I2 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cchcr1Q8K2I2 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cchcr1Q8K2I2 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cchcr1Q8K2I2 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cchcr1Q8K2I2 Gm6433-201ENSMUST00000118634 875 ntBASIC19.09■□□□□ 0.65
Cchcr1Q8K2I2 Gm15565-201ENSMUST00000118890 427 ntBASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms