Protein–RNA interactions for Protein: Q8CIG0

Depdc1a, DEP domain-containing protein 1A, mousemouse

Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1aQ8CIG0 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Depdc1aQ8CIG0 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Depdc1aQ8CIG0 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Depdc1aQ8CIG0 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Depdc1aQ8CIG0 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Depdc1aQ8CIG0 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Depdc1aQ8CIG0 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Depdc1aQ8CIG0 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Depdc1aQ8CIG0 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Depdc1aQ8CIG0 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Depdc1aQ8CIG0 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Depdc1aQ8CIG0 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Depdc1aQ8CIG0 Gm4609-201ENSMUST00000106443 1002 ntBASIC18.15■□□□□ 0.5
Depdc1aQ8CIG0 Gm5138-201ENSMUST00000113842 1002 ntBASIC18.15■□□□□ 0.5
Depdc1aQ8CIG0 Gm15191-201ENSMUST00000117933 1000 ntBASIC18.15■□□□□ 0.5
Depdc1aQ8CIG0 Gm12182-201ENSMUST00000118655 1008 ntBASIC18.15■□□□□ 0.5
Depdc1aQ8CIG0 Gm13882-201ENSMUST00000120886 1002 ntBASIC18.15■□□□□ 0.5
Depdc1aQ8CIG0 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
Depdc1aQ8CIG0 Gm10284-201ENSMUST00000145057 1005 ntBASIC18.15■□□□□ 0.5
Depdc1aQ8CIG0 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Depdc1aQ8CIG0 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC18.15■□□□□ 0.5
Depdc1aQ8CIG0 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Depdc1aQ8CIG0 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC18.15■□□□□ 0.5
Depdc1aQ8CIG0 Gm10481-201ENSMUST00000179228 1002 ntBASIC18.15■□□□□ 0.5
Depdc1aQ8CIG0 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC18.15■□□□□ 0.5
Depdc1aQ8CIG0 Gm2574-201ENSMUST00000181051 1002 ntBASIC18.15■□□□□ 0.5
Depdc1aQ8CIG0 Gm3200-201ENSMUST00000181493 1002 ntBASIC18.15■□□□□ 0.5
Depdc1aQ8CIG0 Gm8825-201ENSMUST00000182565 998 ntBASIC18.15■□□□□ 0.5
Depdc1aQ8CIG0 Gm4518-201ENSMUST00000182638 718 ntBASIC18.15■□□□□ 0.5
Depdc1aQ8CIG0 Gm8330-201ENSMUST00000182754 1008 ntBASIC18.15■□□□□ 0.5
Depdc1aQ8CIG0 Gm4575-201ENSMUST00000182991 1002 ntBASIC18.15■□□□□ 0.5
Depdc1aQ8CIG0 Gm8709-201ENSMUST00000183230 1012 ntBASIC18.15■□□□□ 0.5
Depdc1aQ8CIG0 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Depdc1aQ8CIG0 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC18.15■□□□□ 0.5
Depdc1aQ8CIG0 Gm6089-201ENSMUST00000197666 938 ntBASIC18.15■□□□□ 0.5
Depdc1aQ8CIG0 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC18.15■□□□□ 0.5
Depdc1aQ8CIG0 Gm18622-201ENSMUST00000219361 595 ntBASIC18.15■□□□□ 0.5
Depdc1aQ8CIG0 Gm10293-201ENSMUST00000076317 1002 ntBASIC18.15■□□□□ 0.5
Depdc1aQ8CIG0 Gm6316-201ENSMUST00000082064 1020 ntBASIC18.15■□□□□ 0.5
Depdc1aQ8CIG0 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Depdc1aQ8CIG0 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Depdc1aQ8CIG0 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Depdc1aQ8CIG0 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Depdc1aQ8CIG0 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC18.15■□□□□ 0.5
Depdc1aQ8CIG0 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Depdc1aQ8CIG0 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Depdc1aQ8CIG0 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Depdc1aQ8CIG0 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Depdc1aQ8CIG0 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Depdc1aQ8CIG0 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Depdc1aQ8CIG0 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Depdc1aQ8CIG0 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Depdc1aQ8CIG0 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Depdc1aQ8CIG0 Gm12350-201ENSMUST00000121208 462 ntBASIC18.14■□□□□ 0.49
Depdc1aQ8CIG0 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Depdc1aQ8CIG0 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC18.14■□□□□ 0.49
Depdc1aQ8CIG0 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC18.14■□□□□ 0.49
Depdc1aQ8CIG0 AC138767.1-201ENSMUST00000222661 415 ntBASIC18.14■□□□□ 0.49
Depdc1aQ8CIG0 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Depdc1aQ8CIG0 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Depdc1aQ8CIG0 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Depdc1aQ8CIG0 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Depdc1aQ8CIG0 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Depdc1aQ8CIG0 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Depdc1aQ8CIG0 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Depdc1aQ8CIG0 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Depdc1aQ8CIG0 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Depdc1aQ8CIG0 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Depdc1aQ8CIG0 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Depdc1aQ8CIG0 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Depdc1aQ8CIG0 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Depdc1aQ8CIG0 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Depdc1aQ8CIG0 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC18.13■□□□□ 0.49
Depdc1aQ8CIG0 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Depdc1aQ8CIG0 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Depdc1aQ8CIG0 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Depdc1aQ8CIG0 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Depdc1aQ8CIG0 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Depdc1aQ8CIG0 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Depdc1aQ8CIG0 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Depdc1aQ8CIG0 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Depdc1aQ8CIG0 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Depdc1aQ8CIG0 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Depdc1aQ8CIG0 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC18.13■□□□□ 0.49
Depdc1aQ8CIG0 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Depdc1aQ8CIG0 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Depdc1aQ8CIG0 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Depdc1aQ8CIG0 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Depdc1aQ8CIG0 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Depdc1aQ8CIG0 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Depdc1aQ8CIG0 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Depdc1aQ8CIG0 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC18.12■□□□□ 0.49
Depdc1aQ8CIG0 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Depdc1aQ8CIG0 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Depdc1aQ8CIG0 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Depdc1aQ8CIG0 Gm15173-201ENSMUST00000122049 433 ntBASIC18.12■□□□□ 0.49
Depdc1aQ8CIG0 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Depdc1aQ8CIG0 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
Depdc1aQ8CIG0 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Depdc1aQ8CIG0 AC154757.1-201ENSMUST00000228289 336 ntBASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 75.1 ms