Protein–RNA interactions for Protein: Q8CI71

Vps50, Syndetin, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps50Q8CI71 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vps50Q8CI71 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vps50Q8CI71 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC15.93■□□□□ 0.14
Vps50Q8CI71 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vps50Q8CI71 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vps50Q8CI71 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Vps50Q8CI71 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Vps50Q8CI71 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps50Q8CI71 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps50Q8CI71 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps50Q8CI71 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps50Q8CI71 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps50Q8CI71 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Vps50Q8CI71 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps50Q8CI71 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
Vps50Q8CI71 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps50Q8CI71 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC15.92■□□□□ 0.14
Vps50Q8CI71 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Vps50Q8CI71 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps50Q8CI71 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps50Q8CI71 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Vps50Q8CI71 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Vps50Q8CI71 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps50Q8CI71 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps50Q8CI71 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps50Q8CI71 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps50Q8CI71 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.91■□□□□ 0.14
Vps50Q8CI71 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Vps50Q8CI71 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps50Q8CI71 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps50Q8CI71 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Vps50Q8CI71 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps50Q8CI71 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps50Q8CI71 Gm18958-201ENSMUST00000174258 762 ntBASIC15.91■□□□□ 0.14
Vps50Q8CI71 Gm7367-201ENSMUST00000057611 492 ntBASIC15.91■□□□□ 0.14
Vps50Q8CI71 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Vps50Q8CI71 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps50Q8CI71 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps50Q8CI71 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps50Q8CI71 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Vps50Q8CI71 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps50Q8CI71 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Vps50Q8CI71 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps50Q8CI71 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps50Q8CI71 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Vps50Q8CI71 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps50Q8CI71 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15.91■□□□□ 0.14
Vps50Q8CI71 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps50Q8CI71 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Vps50Q8CI71 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps50Q8CI71 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps50Q8CI71 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
Vps50Q8CI71 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps50Q8CI71 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Vps50Q8CI71 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps50Q8CI71 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps50Q8CI71 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC15.9■□□□□ 0.14
Vps50Q8CI71 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Vps50Q8CI71 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Vps50Q8CI71 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Vps50Q8CI71 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps50Q8CI71 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Vps50Q8CI71 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps50Q8CI71 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Vps50Q8CI71 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps50Q8CI71 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Vps50Q8CI71 Gm4217-201ENSMUST00000182243 1002 ntBASIC15.9■□□□□ 0.14
Vps50Q8CI71 Gm21362-201ENSMUST00000194272 928 ntBASIC15.9■□□□□ 0.14
Vps50Q8CI71 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC15.9■□□□□ 0.14
Vps50Q8CI71 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Vps50Q8CI71 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps50Q8CI71 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps50Q8CI71 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Vps50Q8CI71 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Vps50Q8CI71 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps50Q8CI71 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps50Q8CI71 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.89■□□□□ 0.14
Vps50Q8CI71 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Vps50Q8CI71 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
Vps50Q8CI71 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps50Q8CI71 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Vps50Q8CI71 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Vps50Q8CI71 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps50Q8CI71 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps50Q8CI71 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Vps50Q8CI71 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Vps50Q8CI71 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps50Q8CI71 Gm9013-201ENSMUST00000132939 882 ntBASIC15.89■□□□□ 0.13
Vps50Q8CI71 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC15.89■□□□□ 0.13
Vps50Q8CI71 Gm7213-201ENSMUST00000215977 950 ntBASIC15.89■□□□□ 0.13
Vps50Q8CI71 Gm21559-201ENSMUST00000220638 855 ntBASIC15.89■□□□□ 0.13
Vps50Q8CI71 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC15.89■□□□□ 0.13
Vps50Q8CI71 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps50Q8CI71 Gm8587-201ENSMUST00000076538 843 ntBASIC15.89■□□□□ 0.13
Vps50Q8CI71 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps50Q8CI71 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC15.89■□□□□ 0.13
Vps50Q8CI71 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC15.89■□□□□ 0.13
Vps50Q8CI71 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Vps50Q8CI71 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps50Q8CI71 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms