Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rbm28Q8CGC6 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rbm28Q8CGC6 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rbm28Q8CGC6 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rbm28Q8CGC6 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC19.07■□□□□ 0.64
Rbm28Q8CGC6 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC19.07■□□□□ 0.64
Rbm28Q8CGC6 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rbm28Q8CGC6 Gm27867-201ENSMUST00000184778 125 ntBASIC19.07■□□□□ 0.64
Rbm28Q8CGC6 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC19.07■□□□□ 0.64
Rbm28Q8CGC6 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rbm28Q8CGC6 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rbm28Q8CGC6 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rbm28Q8CGC6 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Rbm28Q8CGC6 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rbm28Q8CGC6 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rbm28Q8CGC6 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC19.07■□□□□ 0.64
Rbm28Q8CGC6 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rbm28Q8CGC6 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Rbm28Q8CGC6 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rbm28Q8CGC6 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rbm28Q8CGC6 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rbm28Q8CGC6 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Rbm28Q8CGC6 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rbm28Q8CGC6 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rbm28Q8CGC6 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Rbm28Q8CGC6 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rbm28Q8CGC6 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC19.06■□□□□ 0.64
Rbm28Q8CGC6 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rbm28Q8CGC6 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rbm28Q8CGC6 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC19.06■□□□□ 0.64
Rbm28Q8CGC6 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rbm28Q8CGC6 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Rbm28Q8CGC6 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC19.06■□□□□ 0.64
Rbm28Q8CGC6 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Rbm28Q8CGC6 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC19.06■□□□□ 0.64
Rbm28Q8CGC6 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC19.06■□□□□ 0.64
Rbm28Q8CGC6 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC19.06■□□□□ 0.64
Rbm28Q8CGC6 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rbm28Q8CGC6 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rbm28Q8CGC6 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rbm28Q8CGC6 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rbm28Q8CGC6 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rbm28Q8CGC6 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rbm28Q8CGC6 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rbm28Q8CGC6 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rbm28Q8CGC6 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rbm28Q8CGC6 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rbm28Q8CGC6 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Rbm28Q8CGC6 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Rbm28Q8CGC6 Gm13216-201ENSMUST00000117145 591 ntBASIC19.05■□□□□ 0.64
Rbm28Q8CGC6 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rbm28Q8CGC6 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC19.05■□□□□ 0.64
Rbm28Q8CGC6 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Rbm28Q8CGC6 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC19.05■□□□□ 0.64
Rbm28Q8CGC6 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC19.05■□□□□ 0.64
Rbm28Q8CGC6 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC19.05■□□□□ 0.64
Rbm28Q8CGC6 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC19.05■□□□□ 0.64
Rbm28Q8CGC6 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rbm28Q8CGC6 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rbm28Q8CGC6 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rbm28Q8CGC6 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Rbm28Q8CGC6 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Rbm28Q8CGC6 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rbm28Q8CGC6 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rbm28Q8CGC6 Gm26917-202ENSMUST00000192833 3329 ntBASIC19.05■□□□□ 0.64
Rbm28Q8CGC6 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC19.05■□□□□ 0.64
Rbm28Q8CGC6 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rbm28Q8CGC6 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Rbm28Q8CGC6 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rbm28Q8CGC6 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rbm28Q8CGC6 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rbm28Q8CGC6 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC19.04■□□□□ 0.64
Rbm28Q8CGC6 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rbm28Q8CGC6 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Rbm28Q8CGC6 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Rbm28Q8CGC6 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC19.04■□□□□ 0.64
Rbm28Q8CGC6 Rps4l-201ENSMUST00000071745 943 ntBASIC19.04■□□□□ 0.64
Rbm28Q8CGC6 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rbm28Q8CGC6 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Rbm28Q8CGC6 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Rbm28Q8CGC6 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rbm28Q8CGC6 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rbm28Q8CGC6 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Rbm28Q8CGC6 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Rbm28Q8CGC6 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Rbm28Q8CGC6 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rbm28Q8CGC6 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rbm28Q8CGC6 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC19.03■□□□□ 0.64
Rbm28Q8CGC6 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rbm28Q8CGC6 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
Rbm28Q8CGC6 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC19.03■□□□□ 0.64
Rbm28Q8CGC6 CT009713.7-201ENSMUST00000224689 571 ntBASIC19.03■□□□□ 0.64
Rbm28Q8CGC6 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC19.03■□□□□ 0.64
Rbm28Q8CGC6 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rbm28Q8CGC6 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Rbm28Q8CGC6 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Rbm28Q8CGC6 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rbm28Q8CGC6 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rbm28Q8CGC6 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Rbm28Q8CGC6 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 132 ms