Protein–RNA interactions for Protein: Q8CDV0

Ccdc178, Coiled-coil domain-containing protein 178, mousemouse

Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc178Q8CDV0 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Ccdc178Q8CDV0 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Ccdc178Q8CDV0 Mir3081-201ENSMUST00000175305 84 ntBASIC19.2■□□□□ 0.66
Ccdc178Q8CDV0 Gm18421-201ENSMUST00000204122 625 ntBASIC19.2■□□□□ 0.66
Ccdc178Q8CDV0 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC19.2■□□□□ 0.66
Ccdc178Q8CDV0 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc178Q8CDV0 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc178Q8CDV0 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc178Q8CDV0 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc178Q8CDV0 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc178Q8CDV0 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc178Q8CDV0 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC19.19■□□□□ 0.66
Ccdc178Q8CDV0 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc178Q8CDV0 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc178Q8CDV0 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Ccdc178Q8CDV0 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc178Q8CDV0 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc178Q8CDV0 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc178Q8CDV0 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc178Q8CDV0 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC19.19■□□□□ 0.66
Ccdc178Q8CDV0 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc178Q8CDV0 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc178Q8CDV0 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
Ccdc178Q8CDV0 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc178Q8CDV0 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc178Q8CDV0 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc178Q8CDV0 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC19.19■□□□□ 0.66
Ccdc178Q8CDV0 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc178Q8CDV0 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
Ccdc178Q8CDV0 Gm45203-201ENSMUST00000206384 1831 ntBASIC19.18■□□□□ 0.66
Ccdc178Q8CDV0 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc178Q8CDV0 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc178Q8CDV0 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Ccdc178Q8CDV0 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc178Q8CDV0 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc178Q8CDV0 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc178Q8CDV0 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc178Q8CDV0 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc178Q8CDV0 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc178Q8CDV0 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC19.18■□□□□ 0.66
Ccdc178Q8CDV0 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Ccdc178Q8CDV0 Ighv6-1-201ENSMUST00000193612 343 ntBASIC19.18■□□□□ 0.66
Ccdc178Q8CDV0 AC159205.3-201ENSMUST00000224614 874 ntBASIC19.18■□□□□ 0.66
Ccdc178Q8CDV0 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Ccdc178Q8CDV0 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc178Q8CDV0 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
Ccdc178Q8CDV0 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc178Q8CDV0 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC19.18■□□□□ 0.66
Ccdc178Q8CDV0 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc178Q8CDV0 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc178Q8CDV0 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc178Q8CDV0 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc178Q8CDV0 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Ccdc178Q8CDV0 Zkscan4-202ENSMUST00000225845 1506 ntBASIC19.17■□□□□ 0.66
Ccdc178Q8CDV0 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc178Q8CDV0 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Ccdc178Q8CDV0 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC19.17■□□□□ 0.66
Ccdc178Q8CDV0 Gm29707-201ENSMUST00000196325 491 ntBASIC19.17■□□□□ 0.66
Ccdc178Q8CDV0 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc178Q8CDV0 Gm18669-201ENSMUST00000216049 778 ntBASIC19.17■□□□□ 0.66
Ccdc178Q8CDV0 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc178Q8CDV0 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Ccdc178Q8CDV0 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc178Q8CDV0 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc178Q8CDV0 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc178Q8CDV0 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc178Q8CDV0 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC19.16■□□□□ 0.66
Ccdc178Q8CDV0 Gfra2-202ENSMUST00000227633 1480 ntBASIC19.16■□□□□ 0.66
Ccdc178Q8CDV0 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Ccdc178Q8CDV0 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc178Q8CDV0 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc178Q8CDV0 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Ccdc178Q8CDV0 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc178Q8CDV0 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc178Q8CDV0 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC19.16■□□□□ 0.66
Ccdc178Q8CDV0 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc178Q8CDV0 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC19.16■□□□□ 0.66
Ccdc178Q8CDV0 Olfr129-201ENSMUST00000122318 993 ntBASIC19.16■□□□□ 0.66
Ccdc178Q8CDV0 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC19.16■□□□□ 0.66
Ccdc178Q8CDV0 Gm28033-201ENSMUST00000184224 96 ntBASIC19.16■□□□□ 0.66
Ccdc178Q8CDV0 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc178Q8CDV0 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc178Q8CDV0 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc178Q8CDV0 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc178Q8CDV0 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc178Q8CDV0 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc178Q8CDV0 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC19.16■□□□□ 0.66
Ccdc178Q8CDV0 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Ccdc178Q8CDV0 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc178Q8CDV0 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc178Q8CDV0 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc178Q8CDV0 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc178Q8CDV0 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc178Q8CDV0 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc178Q8CDV0 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Ccdc178Q8CDV0 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc178Q8CDV0 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc178Q8CDV0 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc178Q8CDV0 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc178Q8CDV0 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms