Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ccdc38Q8CDN8 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ccdc38Q8CDN8 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ccdc38Q8CDN8 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.98■□□□□ 0.47
Ccdc38Q8CDN8 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
Ccdc38Q8CDN8 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ccdc38Q8CDN8 Gm27389-201ENSMUST00000183622 195 ntBASIC17.98■□□□□ 0.47
Ccdc38Q8CDN8 Gm37722-201ENSMUST00000193757 208 ntBASIC17.98■□□□□ 0.47
Ccdc38Q8CDN8 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.98■□□□□ 0.47
Ccdc38Q8CDN8 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ccdc38Q8CDN8 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ccdc38Q8CDN8 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Ccdc38Q8CDN8 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ccdc38Q8CDN8 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ccdc38Q8CDN8 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ccdc38Q8CDN8 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ccdc38Q8CDN8 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ccdc38Q8CDN8 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Ccdc38Q8CDN8 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ccdc38Q8CDN8 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ccdc38Q8CDN8 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ccdc38Q8CDN8 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ccdc38Q8CDN8 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ccdc38Q8CDN8 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ccdc38Q8CDN8 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.97■□□□□ 0.47
Ccdc38Q8CDN8 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ccdc38Q8CDN8 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.97■□□□□ 0.47
Ccdc38Q8CDN8 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ccdc38Q8CDN8 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ccdc38Q8CDN8 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Ccdc38Q8CDN8 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ccdc38Q8CDN8 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ccdc38Q8CDN8 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ccdc38Q8CDN8 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ccdc38Q8CDN8 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ccdc38Q8CDN8 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ccdc38Q8CDN8 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC17.97■□□□□ 0.47
Ccdc38Q8CDN8 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ccdc38Q8CDN8 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ccdc38Q8CDN8 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ccdc38Q8CDN8 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccdc38Q8CDN8 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ccdc38Q8CDN8 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccdc38Q8CDN8 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccdc38Q8CDN8 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Ccdc38Q8CDN8 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccdc38Q8CDN8 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
Ccdc38Q8CDN8 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC17.96■□□□□ 0.47
Ccdc38Q8CDN8 Mir6982-201ENSMUST00000184354 68 ntBASIC17.96■□□□□ 0.47
Ccdc38Q8CDN8 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccdc38Q8CDN8 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccdc38Q8CDN8 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccdc38Q8CDN8 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccdc38Q8CDN8 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccdc38Q8CDN8 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ccdc38Q8CDN8 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.46
Ccdc38Q8CDN8 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Ccdc38Q8CDN8 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Ccdc38Q8CDN8 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
Ccdc38Q8CDN8 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC17.95■□□□□ 0.46
Ccdc38Q8CDN8 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc38Q8CDN8 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc38Q8CDN8 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Ccdc38Q8CDN8 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc38Q8CDN8 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Ccdc38Q8CDN8 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc38Q8CDN8 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Ccdc38Q8CDN8 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.95■□□□□ 0.46
Ccdc38Q8CDN8 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.95■□□□□ 0.46
Ccdc38Q8CDN8 Gm22697-201ENSMUST00000175194 63 ntBASIC17.95■□□□□ 0.46
Ccdc38Q8CDN8 Gm18032-201ENSMUST00000222541 538 ntBASIC17.95■□□□□ 0.46
Ccdc38Q8CDN8 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc38Q8CDN8 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Ccdc38Q8CDN8 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc38Q8CDN8 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Ccdc38Q8CDN8 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc38Q8CDN8 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Ccdc38Q8CDN8 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc38Q8CDN8 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc38Q8CDN8 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc38Q8CDN8 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc38Q8CDN8 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc38Q8CDN8 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc38Q8CDN8 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.94■□□□□ 0.46
Ccdc38Q8CDN8 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc38Q8CDN8 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc38Q8CDN8 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.94■□□□□ 0.46
Ccdc38Q8CDN8 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Ccdc38Q8CDN8 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc38Q8CDN8 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc38Q8CDN8 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc38Q8CDN8 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Ccdc38Q8CDN8 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC17.94■□□□□ 0.46
Ccdc38Q8CDN8 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
Ccdc38Q8CDN8 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC17.94■□□□□ 0.46
Ccdc38Q8CDN8 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc38Q8CDN8 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Ccdc38Q8CDN8 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc38Q8CDN8 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc38Q8CDN8 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms