Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Vcpip1Q8CDG3 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.4■□□□□ 0.38
Vcpip1Q8CDG3 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vcpip1Q8CDG3 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vcpip1Q8CDG3 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vcpip1Q8CDG3 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vcpip1Q8CDG3 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vcpip1Q8CDG3 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vcpip1Q8CDG3 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Vcpip1Q8CDG3 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.39■□□□□ 0.37
Vcpip1Q8CDG3 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Vcpip1Q8CDG3 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Vcpip1Q8CDG3 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vcpip1Q8CDG3 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC17.39■□□□□ 0.37
Vcpip1Q8CDG3 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC17.39■□□□□ 0.37
Vcpip1Q8CDG3 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vcpip1Q8CDG3 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.39■□□□□ 0.37
Vcpip1Q8CDG3 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vcpip1Q8CDG3 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vcpip1Q8CDG3 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.39■□□□□ 0.37
Vcpip1Q8CDG3 Gm45058-201ENSMUST00000205810 766 ntBASIC17.39■□□□□ 0.37
Vcpip1Q8CDG3 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
Vcpip1Q8CDG3 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vcpip1Q8CDG3 Gm10566-201ENSMUST00000086739 996 ntBASIC17.39■□□□□ 0.37
Vcpip1Q8CDG3 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vcpip1Q8CDG3 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vcpip1Q8CDG3 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.39■□□□□ 0.37
Vcpip1Q8CDG3 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vcpip1Q8CDG3 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Vcpip1Q8CDG3 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vcpip1Q8CDG3 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vcpip1Q8CDG3 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.38■□□□□ 0.37
Vcpip1Q8CDG3 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Vcpip1Q8CDG3 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vcpip1Q8CDG3 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vcpip1Q8CDG3 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Vcpip1Q8CDG3 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vcpip1Q8CDG3 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vcpip1Q8CDG3 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Vcpip1Q8CDG3 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vcpip1Q8CDG3 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vcpip1Q8CDG3 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vcpip1Q8CDG3 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vcpip1Q8CDG3 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.38■□□□□ 0.37
Vcpip1Q8CDG3 Gm18421-201ENSMUST00000204122 625 ntBASIC17.38■□□□□ 0.37
Vcpip1Q8CDG3 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.38■□□□□ 0.37
Vcpip1Q8CDG3 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vcpip1Q8CDG3 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vcpip1Q8CDG3 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC17.38■□□□□ 0.37
Vcpip1Q8CDG3 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vcpip1Q8CDG3 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Vcpip1Q8CDG3 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Vcpip1Q8CDG3 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vcpip1Q8CDG3 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Vcpip1Q8CDG3 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC17.38■□□□□ 0.37
Vcpip1Q8CDG3 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Vcpip1Q8CDG3 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Vcpip1Q8CDG3 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vcpip1Q8CDG3 Ccdc166-201ENSMUST00000182172 2584 ntBASIC17.37■□□□□ 0.37
Vcpip1Q8CDG3 Gm42473-201ENSMUST00000201056 2291 ntBASIC17.37■□□□□ 0.37
Vcpip1Q8CDG3 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vcpip1Q8CDG3 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vcpip1Q8CDG3 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vcpip1Q8CDG3 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vcpip1Q8CDG3 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Vcpip1Q8CDG3 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Vcpip1Q8CDG3 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Vcpip1Q8CDG3 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Vcpip1Q8CDG3 Mir5130-201ENSMUST00000175160 84 ntBASIC17.37■□□□□ 0.37
Vcpip1Q8CDG3 Gm29707-201ENSMUST00000196325 491 ntBASIC17.37■□□□□ 0.37
Vcpip1Q8CDG3 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vcpip1Q8CDG3 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vcpip1Q8CDG3 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vcpip1Q8CDG3 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vcpip1Q8CDG3 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vcpip1Q8CDG3 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vcpip1Q8CDG3 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vcpip1Q8CDG3 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vcpip1Q8CDG3 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vcpip1Q8CDG3 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Vcpip1Q8CDG3 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Vcpip1Q8CDG3 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vcpip1Q8CDG3 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vcpip1Q8CDG3 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vcpip1Q8CDG3 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.36■□□□□ 0.37
Vcpip1Q8CDG3 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vcpip1Q8CDG3 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vcpip1Q8CDG3 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vcpip1Q8CDG3 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vcpip1Q8CDG3 Gm11336-201ENSMUST00000118168 334 ntBASIC17.36■□□□□ 0.37
Vcpip1Q8CDG3 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.36■□□□□ 0.37
Vcpip1Q8CDG3 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vcpip1Q8CDG3 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Vcpip1Q8CDG3 Gm18959-201ENSMUST00000208954 655 ntBASIC17.36■□□□□ 0.37
Vcpip1Q8CDG3 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Vcpip1Q8CDG3 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vcpip1Q8CDG3 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
Vcpip1Q8CDG3 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Vcpip1Q8CDG3 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vcpip1Q8CDG3 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms