Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Lysmd4Q8CC84 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Lysmd4Q8CC84 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.52□□□□□ -0.08
Lysmd4Q8CC84 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Lysmd4Q8CC84 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Lysmd4Q8CC84 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Lysmd4Q8CC84 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Lysmd4Q8CC84 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Lysmd4Q8CC84 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Lysmd4Q8CC84 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Lysmd4Q8CC84 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
Lysmd4Q8CC84 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC14.52□□□□□ -0.09
Lysmd4Q8CC84 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Lysmd4Q8CC84 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC14.52□□□□□ -0.09
Lysmd4Q8CC84 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC14.52□□□□□ -0.09
Lysmd4Q8CC84 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Lysmd4Q8CC84 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Lysmd4Q8CC84 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC14.52□□□□□ -0.09
Lysmd4Q8CC84 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Lysmd4Q8CC84 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Lysmd4Q8CC84 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Lysmd4Q8CC84 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Lysmd4Q8CC84 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Lysmd4Q8CC84 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Lysmd4Q8CC84 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Lysmd4Q8CC84 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Lysmd4Q8CC84 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Lysmd4Q8CC84 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.52□□□□□ -0.09
Lysmd4Q8CC84 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Lysmd4Q8CC84 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Lysmd4Q8CC84 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lysmd4Q8CC84 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lysmd4Q8CC84 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lysmd4Q8CC84 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lysmd4Q8CC84 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lysmd4Q8CC84 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Lysmd4Q8CC84 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lysmd4Q8CC84 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lysmd4Q8CC84 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lysmd4Q8CC84 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Lysmd4Q8CC84 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lysmd4Q8CC84 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lysmd4Q8CC84 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Lysmd4Q8CC84 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lysmd4Q8CC84 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Lysmd4Q8CC84 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lysmd4Q8CC84 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lysmd4Q8CC84 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Lysmd4Q8CC84 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lysmd4Q8CC84 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lysmd4Q8CC84 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lysmd4Q8CC84 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lysmd4Q8CC84 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lysmd4Q8CC84 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lysmd4Q8CC84 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lysmd4Q8CC84 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Lysmd4Q8CC84 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lysmd4Q8CC84 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lysmd4Q8CC84 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Lysmd4Q8CC84 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lysmd4Q8CC84 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
Lysmd4Q8CC84 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Lysmd4Q8CC84 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lysmd4Q8CC84 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lysmd4Q8CC84 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lysmd4Q8CC84 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Lysmd4Q8CC84 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lysmd4Q8CC84 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Lysmd4Q8CC84 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
Lysmd4Q8CC84 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC14.5□□□□□ -0.09
Lysmd4Q8CC84 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC14.5□□□□□ -0.09
Lysmd4Q8CC84 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC14.5□□□□□ -0.09
Lysmd4Q8CC84 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC14.5□□□□□ -0.09
Lysmd4Q8CC84 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Lysmd4Q8CC84 Gm16042-201ENSMUST00000204813 1247 ntBASIC14.5□□□□□ -0.09
Lysmd4Q8CC84 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC14.5□□□□□ -0.09
Lysmd4Q8CC84 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lysmd4Q8CC84 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lysmd4Q8CC84 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Lysmd4Q8CC84 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Lysmd4Q8CC84 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lysmd4Q8CC84 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
Lysmd4Q8CC84 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lysmd4Q8CC84 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Lysmd4Q8CC84 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lysmd4Q8CC84 Gm32996-201ENSMUST00000199828 1447 ntBASIC14.49□□□□□ -0.09
Lysmd4Q8CC84 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lysmd4Q8CC84 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Lysmd4Q8CC84 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lysmd4Q8CC84 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lysmd4Q8CC84 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Lysmd4Q8CC84 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lysmd4Q8CC84 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lysmd4Q8CC84 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lysmd4Q8CC84 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.49□□□□□ -0.09
Lysmd4Q8CC84 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lysmd4Q8CC84 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Lysmd4Q8CC84 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lysmd4Q8CC84 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lysmd4Q8CC84 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms