Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Shisa4Q8CA71 Gm13884-201ENSMUST00000118103 829 ntBASIC18.75■□□□□ 0.59
Shisa4Q8CA71 Mir8098-201ENSMUST00000184011 137 ntBASIC18.75■□□□□ 0.59
Shisa4Q8CA71 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Shisa4Q8CA71 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Shisa4Q8CA71 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Shisa4Q8CA71 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Shisa4Q8CA71 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Shisa4Q8CA71 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Shisa4Q8CA71 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Shisa4Q8CA71 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Shisa4Q8CA71 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Shisa4Q8CA71 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Shisa4Q8CA71 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Shisa4Q8CA71 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Shisa4Q8CA71 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Shisa4Q8CA71 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Shisa4Q8CA71 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Shisa4Q8CA71 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Shisa4Q8CA71 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
Shisa4Q8CA71 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Shisa4Q8CA71 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC18.74■□□□□ 0.59
Shisa4Q8CA71 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC18.74■□□□□ 0.59
Shisa4Q8CA71 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC18.74■□□□□ 0.59
Shisa4Q8CA71 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Shisa4Q8CA71 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Shisa4Q8CA71 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Shisa4Q8CA71 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Shisa4Q8CA71 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Shisa4Q8CA71 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Shisa4Q8CA71 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Shisa4Q8CA71 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC18.74■□□□□ 0.59
Shisa4Q8CA71 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Shisa4Q8CA71 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.73■□□□□ 0.59
Shisa4Q8CA71 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Shisa4Q8CA71 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Shisa4Q8CA71 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Shisa4Q8CA71 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Shisa4Q8CA71 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Shisa4Q8CA71 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Shisa4Q8CA71 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Shisa4Q8CA71 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC18.73■□□□□ 0.59
Shisa4Q8CA71 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
Shisa4Q8CA71 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC18.73■□□□□ 0.59
Shisa4Q8CA71 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Shisa4Q8CA71 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Shisa4Q8CA71 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Shisa4Q8CA71 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Shisa4Q8CA71 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Shisa4Q8CA71 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Shisa4Q8CA71 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Shisa4Q8CA71 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Shisa4Q8CA71 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Shisa4Q8CA71 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Shisa4Q8CA71 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Shisa4Q8CA71 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Shisa4Q8CA71 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Shisa4Q8CA71 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Shisa4Q8CA71 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Shisa4Q8CA71 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Shisa4Q8CA71 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC18.72■□□□□ 0.59
Shisa4Q8CA71 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
Shisa4Q8CA71 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Shisa4Q8CA71 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Shisa4Q8CA71 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Shisa4Q8CA71 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Shisa4Q8CA71 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Shisa4Q8CA71 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Shisa4Q8CA71 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Shisa4Q8CA71 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Shisa4Q8CA71 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Shisa4Q8CA71 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Shisa4Q8CA71 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Shisa4Q8CA71 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Shisa4Q8CA71 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shisa4Q8CA71 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shisa4Q8CA71 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shisa4Q8CA71 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Shisa4Q8CA71 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shisa4Q8CA71 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Shisa4Q8CA71 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shisa4Q8CA71 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC18.71■□□□□ 0.59
Shisa4Q8CA71 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Shisa4Q8CA71 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC18.71■□□□□ 0.59
Shisa4Q8CA71 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shisa4Q8CA71 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC18.71■□□□□ 0.59
Shisa4Q8CA71 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Shisa4Q8CA71 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Shisa4Q8CA71 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Shisa4Q8CA71 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shisa4Q8CA71 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shisa4Q8CA71 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Shisa4Q8CA71 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shisa4Q8CA71 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.71■□□□□ 0.59
Shisa4Q8CA71 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Shisa4Q8CA71 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.7■□□□□ 0.58
Shisa4Q8CA71 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Shisa4Q8CA71 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC18.7■□□□□ 0.58
Shisa4Q8CA71 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC18.7■□□□□ 0.58
Shisa4Q8CA71 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms