Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Sh3rf3Q8C120 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sh3rf3Q8C120 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sh3rf3Q8C120 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sh3rf3Q8C120 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Sh3rf3Q8C120 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.86■□□□□ 0.29
Sh3rf3Q8C120 Gm9013-201ENSMUST00000132939 882 ntBASIC16.86■□□□□ 0.29
Sh3rf3Q8C120 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Sh3rf3Q8C120 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sh3rf3Q8C120 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.86■□□□□ 0.29
Sh3rf3Q8C120 Gm36967-201ENSMUST00000193814 266 ntBASIC16.86■□□□□ 0.29
Sh3rf3Q8C120 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sh3rf3Q8C120 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sh3rf3Q8C120 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sh3rf3Q8C120 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Sh3rf3Q8C120 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
Sh3rf3Q8C120 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Sh3rf3Q8C120 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Sh3rf3Q8C120 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sh3rf3Q8C120 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC16.85■□□□□ 0.29
Sh3rf3Q8C120 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sh3rf3Q8C120 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sh3rf3Q8C120 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sh3rf3Q8C120 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Sh3rf3Q8C120 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sh3rf3Q8C120 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sh3rf3Q8C120 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sh3rf3Q8C120 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Sh3rf3Q8C120 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Sh3rf3Q8C120 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sh3rf3Q8C120 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Sh3rf3Q8C120 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Sh3rf3Q8C120 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sh3rf3Q8C120 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.85■□□□□ 0.29
Sh3rf3Q8C120 Gm6623-201ENSMUST00000173570 544 ntBASIC16.85■□□□□ 0.29
Sh3rf3Q8C120 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sh3rf3Q8C120 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Sh3rf3Q8C120 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sh3rf3Q8C120 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sh3rf3Q8C120 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sh3rf3Q8C120 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sh3rf3Q8C120 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sh3rf3Q8C120 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.85■□□□□ 0.29
Sh3rf3Q8C120 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sh3rf3Q8C120 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sh3rf3Q8C120 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sh3rf3Q8C120 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.85■□□□□ 0.29
Sh3rf3Q8C120 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3rf3Q8C120 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3rf3Q8C120 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3rf3Q8C120 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3rf3Q8C120 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3rf3Q8C120 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3rf3Q8C120 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3rf3Q8C120 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3rf3Q8C120 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.84■□□□□ 0.29
Sh3rf3Q8C120 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3rf3Q8C120 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3rf3Q8C120 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3rf3Q8C120 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.84■□□□□ 0.29
Sh3rf3Q8C120 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Sh3rf3Q8C120 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3rf3Q8C120 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3rf3Q8C120 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3rf3Q8C120 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3rf3Q8C120 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3rf3Q8C120 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3rf3Q8C120 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3rf3Q8C120 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3rf3Q8C120 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3rf3Q8C120 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Sh3rf3Q8C120 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3rf3Q8C120 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3rf3Q8C120 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Sh3rf3Q8C120 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3rf3Q8C120 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Sh3rf3Q8C120 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3rf3Q8C120 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3rf3Q8C120 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3rf3Q8C120 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3rf3Q8C120 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3rf3Q8C120 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3rf3Q8C120 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Sh3rf3Q8C120 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.83■□□□□ 0.29
Sh3rf3Q8C120 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Sh3rf3Q8C120 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Sh3rf3Q8C120 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Sh3rf3Q8C120 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Sh3rf3Q8C120 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
Sh3rf3Q8C120 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sh3rf3Q8C120 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sh3rf3Q8C120 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sh3rf3Q8C120 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sh3rf3Q8C120 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Sh3rf3Q8C120 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.83■□□□□ 0.28
Sh3rf3Q8C120 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
Sh3rf3Q8C120 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Sh3rf3Q8C120 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.28
Sh3rf3Q8C120 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sh3rf3Q8C120 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms