Protein–RNA interactions for Protein: Q8BUM3

Ptpn7, Tyrosine-protein phosphatase non-receptor type 7, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpn7Q8BUM3 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ptpn7Q8BUM3 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ptpn7Q8BUM3 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ptpn7Q8BUM3 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ptpn7Q8BUM3 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ptpn7Q8BUM3 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ptpn7Q8BUM3 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ptpn7Q8BUM3 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ptpn7Q8BUM3 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC15.16■□□□□ 0.02
Ptpn7Q8BUM3 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ptpn7Q8BUM3 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC15.15■□□□□ 0.02
Ptpn7Q8BUM3 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ptpn7Q8BUM3 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ptpn7Q8BUM3 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ptpn7Q8BUM3 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ptpn7Q8BUM3 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ptpn7Q8BUM3 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ptpn7Q8BUM3 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ptpn7Q8BUM3 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ptpn7Q8BUM3 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ptpn7Q8BUM3 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ptpn7Q8BUM3 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC15.15■□□□□ 0.02
Ptpn7Q8BUM3 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC15.15■□□□□ 0.02
Ptpn7Q8BUM3 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC15.15■□□□□ 0.02
Ptpn7Q8BUM3 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC15.15■□□□□ 0.02
Ptpn7Q8BUM3 Gm2274-201ENSMUST00000184539 609 ntBASIC15.15■□□□□ 0.02
Ptpn7Q8BUM3 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ptpn7Q8BUM3 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ptpn7Q8BUM3 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ptpn7Q8BUM3 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ptpn7Q8BUM3 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ptpn7Q8BUM3 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ptpn7Q8BUM3 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ptpn7Q8BUM3 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ptpn7Q8BUM3 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ptpn7Q8BUM3 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ptpn7Q8BUM3 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ptpn7Q8BUM3 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ptpn7Q8BUM3 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ptpn7Q8BUM3 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ptpn7Q8BUM3 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Ptpn7Q8BUM3 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ptpn7Q8BUM3 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ptpn7Q8BUM3 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
Ptpn7Q8BUM3 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ptpn7Q8BUM3 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Ptpn7Q8BUM3 Gm30025-201ENSMUST00000218555 728 ntBASIC15.14■□□□□ 0.01
Ptpn7Q8BUM3 Gm7370-201ENSMUST00000219471 767 ntBASIC15.14■□□□□ 0.01
Ptpn7Q8BUM3 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ptpn7Q8BUM3 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ptpn7Q8BUM3 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ptpn7Q8BUM3 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ptpn7Q8BUM3 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ptpn7Q8BUM3 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ptpn7Q8BUM3 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.14■□□□□ 0.01
Ptpn7Q8BUM3 Zfp264-201ENSMUST00000208656 1563 ntBASIC15.14■□□□□ 0.01
Ptpn7Q8BUM3 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ptpn7Q8BUM3 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ptpn7Q8BUM3 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ptpn7Q8BUM3 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ptpn7Q8BUM3 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC15.13■□□□□ 0.01
Ptpn7Q8BUM3 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ptpn7Q8BUM3 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ptpn7Q8BUM3 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ptpn7Q8BUM3 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ptpn7Q8BUM3 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ptpn7Q8BUM3 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ptpn7Q8BUM3 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ptpn7Q8BUM3 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ptpn7Q8BUM3 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ptpn7Q8BUM3 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.13■□□□□ 0.01
Ptpn7Q8BUM3 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ptpn7Q8BUM3 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ptpn7Q8BUM3 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ptpn7Q8BUM3 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC15.13■□□□□ 0.01
Ptpn7Q8BUM3 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ptpn7Q8BUM3 Gm13474-201ENSMUST00000122466 815 ntBASIC15.13■□□□□ 0.01
Ptpn7Q8BUM3 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC15.13■□□□□ 0.01
Ptpn7Q8BUM3 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ptpn7Q8BUM3 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ptpn7Q8BUM3 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC15.13■□□□□ 0.01
Ptpn7Q8BUM3 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ptpn7Q8BUM3 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Ptpn7Q8BUM3 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ptpn7Q8BUM3 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ptpn7Q8BUM3 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ptpn7Q8BUM3 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ptpn7Q8BUM3 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ptpn7Q8BUM3 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ptpn7Q8BUM3 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ptpn7Q8BUM3 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ptpn7Q8BUM3 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ptpn7Q8BUM3 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ptpn7Q8BUM3 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ptpn7Q8BUM3 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ptpn7Q8BUM3 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ptpn7Q8BUM3 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ptpn7Q8BUM3 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ptpn7Q8BUM3 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ptpn7Q8BUM3 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms